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Cluster: KY225_44_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_18366 k141_18366_4 4497 5615 + 3.A.1.122.13
STP k141_18366 k141_18366_5 5733 6524 - HD
peptidase k141_18366 k141_18366_6 6650 7534 - C44.UPW
TC k141_18366 k141_18366_7 7735 9912 - 2.A.72.1.3
pfam k141_18366 k141_18366_8 10137 11093 - TatD_DNase
CAZyme k141_18366 k141_18366_9 11186 13636 - GH36
CAZyme k141_18366 k141_18366_10 13954 16119 - GH127
NULL(UNKNOWN) k141_18366 k141_18366_11 16116 16382 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_18366 k141_18366_12 16387 16656 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_18366 k141_18366_13 17001 18788 - 3.A.1.106.3
TC k141_18366 k141_18366_14 18819 20750 - 3.A.1.106.3
peptidase k141_18366 k141_18366_15 21149 22246 + S09.UPW
CAZyme k141_18366 k141_18366_16 22947 24101 - GH172
STP k141_18366 k141_18366_17 24333 24785 + EAL
TF k141_18366 k141_18366_18 24858 25874 + LacI
CAZyme k141_18366 k141_18366_19 25954 27285 - CE9
TC k141_18366 k141_18366_20 27301 27981 - 3.A.1.1.48
Gene ID: k141_18366_4
Type: TC
Location: 4497 - 5615 (+)
Gene ID: k141_18366_5
Type: STP
Location: 5733 - 6524 (-)
Gene ID: k141_18366_6
Type: peptidase
Location: 6650 - 7534 (-)
Gene ID: k141_18366_7
Type: TC
Location: 7735 - 9912 (-)
Gene ID: k141_18366_8
Type: pfam
Location: 10137 - 11093 (-)
Gene ID: k141_18366_9
Type: CAZyme
Location: 11186 - 13636 (-)
Gene ID: k141_18366_10
Type: CAZyme
Location: 13954 - 16119 (-)
Gene ID: k141_18366_11
Type:
Location: 16116 - 16382 (-)
Gene ID: k141_18366_12
Type:
Location: 16387 - 16656 (-)
Gene ID: k141_18366_13
Type: TC
Location: 17001 - 18788 (-)
Gene ID: k141_18366_14
Type: TC
Location: 18819 - 20750 (-)
Gene ID: k141_18366_15
Type: peptidase
Location: 21149 - 22246 (+)
Gene ID: k141_18366_16
Type: CAZyme
Location: 22947 - 24101 (-)
Gene ID: k141_18366_17
Type: STP
Location: 24333 - 24785 (+)
Gene ID: k141_18366_18
Type: TF
Location: 24858 - 25874 (+)
Gene ID: k141_18366_19
Type: CAZyme
Location: 25954 - 27285 (-)
Gene ID: k141_18366_20
Type: TC
Location: 27301 - 27981 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_18366_17 vegan > omnivore 1.03344 0.00565
k141_18366_17 vegetarian > omnivore 1.22452 0.00754
k141_18366_18 vegetarian > omnivore 1.36299 0.00754
k141_18366_19 vegan > omnivore 1.28057 0.00565
k141_18366_19 vegetarian > omnivore 1.37911 0.00754
k141_18366_20 vegan > omnivore 1.16188 0.00565
k141_18366_20 vegetarian > omnivore 1.26196 0.00754

🧭 Explore Read Mapping of CGC

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