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Cluster: KY225_44_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_221425 k141_221425_9 10478 11605 - 3.A.1.1.23
TF k141_221425 k141_221425_10 11924 12640 + LytTR
pfam k141_221425 k141_221425_11 12637 13431 + HATPase_c | HATPase_c_5
TC k141_221425 k141_221425_12 13508 14878 - 2.A.49.9.3
pfam k141_221425 k141_221425_13 14955 16226 - AAA_14 | DUF4143
pfam k141_221425 k141_221425_14 16504 17061 - GtrA_DPMS_TM
CAZyme k141_221425 k141_221425_15 17054 19483 - GH3
pfam k141_221425 k141_221425_16 19750 20157 - PAP2
pfam k141_221425 k141_221425_17 20663 21100 + Acetyltransf_1 | FR47 | Acetyltransf_6 | Acetyltransf_7 | Acetyltransf_10
TC k141_221425 k141_221425_18 21246 21881 - 3.A.1.122.13
pfam k141_221425 k141_221425_19 21894 23117 - FtsX
pfam k141_221425 k141_221425_20 23114 24481 - FtsX
TC k141_221425 k141_221425_21 24768 26288 - 2.A.2.2.3
CAZyme k141_221425 k141_221425_22 26599 29670 + GH2
Gene ID: k141_221425_9
Type: TC
Location: 10478 - 11605 (-)
Gene ID: k141_221425_10
Type: TF
Location: 11924 - 12640 (+)
Gene ID: k141_221425_11
Type: pfam
Location: 12637 - 13431 (+)
Gene ID: k141_221425_12
Type: TC
Location: 13508 - 14878 (-)
Gene ID: k141_221425_13
Type: pfam
Location: 14955 - 16226 (-)
Gene ID: k141_221425_14
Type: pfam
Location: 16504 - 17061 (-)
Gene ID: k141_221425_15
Type: CAZyme
Location: 17054 - 19483 (-)
Gene ID: k141_221425_16
Type: pfam
Location: 19750 - 20157 (-)
Gene ID: k141_221425_17
Type: pfam
Location: 20663 - 21100 (+)
Gene ID: k141_221425_18
Type: TC
Location: 21246 - 21881 (-)
Gene ID: k141_221425_19
Type: pfam
Location: 21894 - 23117 (-)
Gene ID: k141_221425_20
Type: pfam
Location: 23114 - 24481 (-)
Gene ID: k141_221425_21
Type: TC
Location: 24768 - 26288 (-)
Gene ID: k141_221425_22
Type: CAZyme
Location: 26599 - 29670 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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