Cluster: KY215_maxbin.014_CGC14
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: KY215_maxbin.014
- CGC Family ID: CGCFAM_00929
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_179255 | k141_179255_25 | 26625 | 28013 | + | GH1 |
| TF | k141_179255 | k141_179255_26 | 28034 | 28855 | - | HTH_6 |
| pfam | k141_179255 | k141_179255_27 | 29143 | 29910 | + | YdjC |
| TC | k141_179255 | k141_179255_28 | 30065 | 31357 | + | 4.A.3.2.2 |
| TC | k141_179255 | k141_179255_29 | 31406 | 31702 | + | 4.A.3.2.6 |
| TC | k141_179255 | k141_179255_30 | 31705 | 32046 | + | 4.A.3.2.1 |
| CAZyme | k141_179255 | k141_179255_31 | 32132 | 33619 | + | GH1 |
| pfam | k141_179255 | k141_179255_32 | 33644 | 34552 | + | ROK |
| CAZyme | k141_179255 | k141_179255_33 | 34964 | 36394 | + | GH1 |
| pfam | k141_179255 | k141_179255_34 | 36680 | 38191 | - | Sde182_NH-like |
| peptidase | k141_179255 | k141_179255_35 | 38457 | 39794 | - | S09.UPW |
| TC | k141_179255 | k141_179255_36 | 40284 | 41711 | + | 4.A.1.2.11 |
| CAZyme | k141_179255 | k141_179255_37 | 41922 | 43235 | + | GH140 |
Gene ID: k141_179255_25
Type: CAZyme
Location: 26625 - 28013 (+)
Type: CAZyme
Location: 26625 - 28013 (+)
Gene ID: k141_179255_26
Type: TF
Location: 28034 - 28855 (-)
Type: TF
Location: 28034 - 28855 (-)
Gene ID: k141_179255_27
Type: pfam
Location: 29143 - 29910 (+)
Type: pfam
Location: 29143 - 29910 (+)
Gene ID: k141_179255_28
Type: TC
Location: 30065 - 31357 (+)
Type: TC
Location: 30065 - 31357 (+)
Gene ID: k141_179255_29
Type: TC
Location: 31406 - 31702 (+)
Type: TC
Location: 31406 - 31702 (+)
Gene ID: k141_179255_30
Type: TC
Location: 31705 - 32046 (+)
Type: TC
Location: 31705 - 32046 (+)
Gene ID: k141_179255_31
Type: CAZyme
Location: 32132 - 33619 (+)
Type: CAZyme
Location: 32132 - 33619 (+)
Gene ID: k141_179255_32
Type: pfam
Location: 33644 - 34552 (+)
Type: pfam
Location: 33644 - 34552 (+)
Gene ID: k141_179255_33
Type: CAZyme
Location: 34964 - 36394 (+)
Type: CAZyme
Location: 34964 - 36394 (+)
Gene ID: k141_179255_34
Type: pfam
Location: 36680 - 38191 (-)
Type: pfam
Location: 36680 - 38191 (-)
Gene ID: k141_179255_35
Type: peptidase
Location: 38457 - 39794 (-)
Type: peptidase
Location: 38457 - 39794 (-)
Gene ID: k141_179255_36
Type: TC
Location: 40284 - 41711 (+)
Type: TC
Location: 40284 - 41711 (+)
Gene ID: k141_179255_37
Type: CAZyme
Location: 41922 - 43235 (+)
Type: CAZyme
Location: 41922 - 43235 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp019041915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_179255_37 | vegetarian > vegan | 1.03472 | 0.01882 |