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Cluster: KY214_bin.23_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_228837 k141_228837_12 12687 15011 + GT35
pfam k141_228837 k141_228837_13 15111 16973 + Peptidase_M28
TC k141_228837 k141_228837_14 17049 17693 - 9.B.28.1.3
TC k141_228837 k141_228837_15 17932 19290 + 3.A.1.1.45
TC k141_228837 k141_228837_16 19479 20402 + 3.A.1.1.45
TC k141_228837 k141_228837_17 20402 21247 + 3.A.1.1.45
TF k141_228837 k141_228837_18 21247 22251 + LacI
CAZyme k141_228837 k141_228837_19 22273 23754 + GH77
Gene ID: k141_228837_12
Type: CAZyme
Location: 12687 - 15011 (+)
Gene ID: k141_228837_13
Type: pfam
Location: 15111 - 16973 (+)
Gene ID: k141_228837_14
Type: TC
Location: 17049 - 17693 (-)
Gene ID: k141_228837_15
Type: TC
Location: 17932 - 19290 (+)
Gene ID: k141_228837_16
Type: TC
Location: 19479 - 20402 (+)
Gene ID: k141_228837_17
Type: TC
Location: 20402 - 21247 (+)
Gene ID: k141_228837_18
Type: TF
Location: 21247 - 22251 (+)
Gene ID: k141_228837_19
Type: CAZyme
Location: 22273 - 23754 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_228837_18 vegetarian > vegan 1.01934 0.00272

🧭 Explore Read Mapping of CGC

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