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Cluster: KY200_bin.16_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_176646 k141_176646_1 148 2544 + 5.A.3.3.1
pfam k141_176646 k141_176646_2 2554 2952 + Fer4_9
CAZyme k141_176646 k141_176646_3 3122 4387 + GT4
STP k141_176646 k141_176646_4 4529 5758 + Aminotran_1_2
TC k141_176646 k141_176646_5 5759 6403 + 9.B.18.1.2
pfam k141_176646 k141_176646_6 6534 6944 + Pep_deformylase
TC k141_176646 k141_176646_7 7188 7865 - 3.A.1.24.5
TC k141_176646 k141_176646_8 7869 8618 - 3.A.1.24.2
TC k141_176646 k141_176646_9 8648 9508 - 3.A.1.24.5
pfam k141_176646 k141_176646_10 9843 11186 + Gln-synt_C | Gln-synt_N
TF k141_176646 k141_176646_11 11219 11896 + Trans_reg_C
TC k141_176646 k141_176646_12 11924 13513 - 1.I.1.1.3
CAZyme k141_176646 k141_176646_13 13559 14989 - GT28
pfam k141_176646 k141_176646_14 15005 15421 - GtrA_DPMS_TM
CAZyme k141_176646 k141_176646_15 15689 16675 + GT81
TC k141_176646 k141_176646_16 16944 20462 + 3.A.1.106.7
CAZyme k141_176646 k141_176646_17 20647 21675 - GH25
Gene ID: k141_176646_1
Type: TC
Location: 148 - 2544 (+)
Gene ID: k141_176646_2
Type: pfam
Location: 2554 - 2952 (+)
Gene ID: k141_176646_3
Type: CAZyme
Location: 3122 - 4387 (+)
Gene ID: k141_176646_4
Type: STP
Location: 4529 - 5758 (+)
Gene ID: k141_176646_5
Type: TC
Location: 5759 - 6403 (+)
Gene ID: k141_176646_6
Type: pfam
Location: 6534 - 6944 (+)
Gene ID: k141_176646_7
Type: TC
Location: 7188 - 7865 (-)
Gene ID: k141_176646_8
Type: TC
Location: 7869 - 8618 (-)
Gene ID: k141_176646_9
Type: TC
Location: 8648 - 9508 (-)
Gene ID: k141_176646_10
Type: pfam
Location: 9843 - 11186 (+)
Gene ID: k141_176646_11
Type: TF
Location: 11219 - 11896 (+)
Gene ID: k141_176646_12
Type: TC
Location: 11924 - 13513 (-)
Gene ID: k141_176646_13
Type: CAZyme
Location: 13559 - 14989 (-)
Gene ID: k141_176646_14
Type: pfam
Location: 15005 - 15421 (-)
Gene ID: k141_176646_15
Type: CAZyme
Location: 15689 - 16675 (+)
Gene ID: k141_176646_16
Type: TC
Location: 16944 - 20462 (+)
Gene ID: k141_176646_17
Type: CAZyme
Location: 20647 - 21675 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_176646_2 vegan > omnivore 1.16349 0.00524
k141_176646_2 vegetarian > omnivore 1.58165 0.00028
k141_176646_3 vegetarian > omnivore 1.18742 0.00028
k141_176646_4 vegan > omnivore 1.16681 0.00524
k141_176646_4 vegetarian > omnivore 1.59103 0.00028
k141_176646_5 vegan > omnivore 1.29608 0.00524
k141_176646_5 vegetarian > omnivore 1.76690 0.00028

🧭 Explore Read Mapping of CGC

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