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Cluster: KY200_bin.16_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_195888 k141_195888_14 16371 18197 + 9.B.18.2.1
CAZyme k141_195888 k141_195888_15 18285 19034 + GT2
pfam k141_195888 k141_195888_16 20208 21812 + PS_pyruv_trans
CAZyme k141_195888 k141_195888_17 22319 23434 - GT2
TC k141_195888 k141_195888_18 23442 25331 - 3.A.1.103.1
CAZyme k141_195888 k141_195888_19 25389 26927 + CBM13 | CBM13
pfam k141_195888 k141_195888_20 27086 28444 + AAA_14 | DUF4143
pfam k141_195888 k141_195888_21 28560 30650 + DUF6541
CAZyme k141_195888 k141_195888_22 30656 31849 - GT4
CAZyme k141_195888 k141_195888_23 32004 32699 + GT2
Gene ID: k141_195888_14
Type: TC
Location: 16371 - 18197 (+)
Gene ID: k141_195888_15
Type: CAZyme
Location: 18285 - 19034 (+)
Gene ID: k141_195888_16
Type: pfam
Location: 20208 - 21812 (+)
Gene ID: k141_195888_17
Type: CAZyme
Location: 22319 - 23434 (-)
Gene ID: k141_195888_18
Type: TC
Location: 23442 - 25331 (-)
Gene ID: k141_195888_19
Type: CAZyme
Location: 25389 - 26927 (+)
Gene ID: k141_195888_20
Type: pfam
Location: 27086 - 28444 (+)
Gene ID: k141_195888_21
Type: pfam
Location: 28560 - 30650 (+)
Gene ID: k141_195888_22
Type: CAZyme
Location: 30656 - 31849 (-)
Gene ID: k141_195888_23
Type: CAZyme
Location: 32004 - 32699 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_195888_17 vegan > omnivore 2.83154 0.00524
k141_195888_17 vegetarian > omnivore 3.51441 0.00028
k141_195888_19 vegetarian > omnivore 2.15130 0.00028
k141_195888_19 vegetarian > vegan 1.15596 0.00861
k141_195888_20 vegan > omnivore 1.41457 0.00524
k141_195888_20 vegetarian > omnivore 2.52891 0.00028
k141_195888_20 vegetarian > vegan 1.11434 0.00861
k141_195888_21 vegetarian > omnivore 1.42422 0.00028
k141_195888_22 vegan > omnivore 1.27709 0.00524
k141_195888_22 vegetarian > omnivore 2.19483 0.00028
k141_195888_23 vegan > omnivore 1.84189 0.00524
k141_195888_23 vegetarian > omnivore 2.44899 0.00028

🧭 Explore Read Mapping of CGC

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