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Cluster: KY200_bin.16_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_83051 k141_83051_15 15030 16151 - GT28
TC k141_83051 k141_83051_16 16156 17502 - 2.A.103.1.4
pfam k141_83051 k141_83051_17 17517 19016 - Mur_ligase_C | Mur_ligase_M
TC k141_83051 k141_83051_18 19047 20084 - 9.B.146.1.6
Gene ID: k141_83051_15
Type: CAZyme
Location: 15030 - 16151 (-)
Gene ID: k141_83051_16
Type: TC
Location: 16156 - 17502 (-)
Gene ID: k141_83051_17
Type: pfam
Location: 17517 - 19016 (-)
Gene ID: k141_83051_18
Type: TC
Location: 19047 - 20084 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_83051_15 vegan > omnivore 2.58291 0.00524
k141_83051_15 vegetarian > omnivore 2.97019 0.00028
k141_83051_16 vegan > omnivore 2.02189 0.00524
k141_83051_16 vegetarian > omnivore 2.37954 0.00028
k141_83051_17 vegan > omnivore 2.34019 0.00524
k141_83051_17 vegetarian > omnivore 3.17666 0.00028

🧭 Explore Read Mapping of CGC

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