Cluster: KY187_71_sub_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: KY187_71_sub
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_42872 | k141_42872_19 | 23883 | 26210 | - | 9.A.8.1.6 |
| TC | k141_42872 | k141_42872_20 | 26334 | 26555 | - | 9.A.8.1.6 |
| STP | k141_42872 | k141_42872_21 | 26595 | 26837 | - | FeoA |
| STP | k141_42872 | k141_42872_22 | 27026 | 27274 | - | PTS-HPr |
| TC | k141_42872 | k141_42872_23 | 27696 | 29159 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | k141_42872 | k141_42872_24 | 29313 | 29768 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_42872 | k141_42872_25 | 29772 | 32780 | - | GH2 |
Gene ID: k141_42872_19
Type: TC
Location: 23883 - 26210 (-)
Type: TC
Location: 23883 - 26210 (-)
Gene ID: k141_42872_20
Type: TC
Location: 26334 - 26555 (-)
Type: TC
Location: 26334 - 26555 (-)
Gene ID: k141_42872_21
Type: STP
Location: 26595 - 26837 (-)
Type: STP
Location: 26595 - 26837 (-)
Gene ID: k141_42872_22
Type: STP
Location: 27026 - 27274 (-)
Type: STP
Location: 27026 - 27274 (-)
Gene ID: k141_42872_23
Type: TC
Location: 27696 - 29159 (-)
Type: TC
Location: 27696 - 29159 (-)
Gene ID: k141_42872_24
Type:
Location: 29313 - 29768 (-)
Type:
Location: 29313 - 29768 (-)
Gene ID: k141_42872_25
Type: CAZyme
Location: 29772 - 32780 (-)
Type: CAZyme
Location: 29772 - 32780 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.