Cluster: KY171_bin.82_CGC6
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: KY171_bin.82
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_286700 | k141_286700_88 | 85087 | 86508 | - | GH1 |
| TC | k141_286700 | k141_286700_89 | 86583 | 88361 | - | 4.A.3.1.1 |
| TF | k141_286700 | k141_286700_90 | 88637 | 89647 | + | LacI |
| TC | k141_286700 | k141_286700_91 | 89980 | 91740 | - | 4.A.3.1.1 |
| CAZyme | k141_286700 | k141_286700_92 | 91917 | 93359 | - | GH1 |
| TF | k141_286700 | k141_286700_93 | 93701 | 94738 | + | LacI |
| CAZyme | k141_286700 | k141_286700_94 | 95000 | 96439 | - | GH1 |
| TC | k141_286700 | k141_286700_95 | 96506 | 98281 | - | 4.A.3.1.1 |
| TF | k141_286700 | k141_286700_96 | 98609 | 99643 | + | LacI |
| TC | k141_286700 | k141_286700_97 | 99858 | 100196 | + | 4.A.3.1.2 |
Gene ID: k141_286700_88
Type: CAZyme
Location: 85087 - 86508 (-)
Type: CAZyme
Location: 85087 - 86508 (-)
Gene ID: k141_286700_89
Type: TC
Location: 86583 - 88361 (-)
Type: TC
Location: 86583 - 88361 (-)
Gene ID: k141_286700_90
Type: TF
Location: 88637 - 89647 (+)
Type: TF
Location: 88637 - 89647 (+)
Gene ID: k141_286700_91
Type: TC
Location: 89980 - 91740 (-)
Type: TC
Location: 89980 - 91740 (-)
Gene ID: k141_286700_92
Type: CAZyme
Location: 91917 - 93359 (-)
Type: CAZyme
Location: 91917 - 93359 (-)
Gene ID: k141_286700_93
Type: TF
Location: 93701 - 94738 (+)
Type: TF
Location: 93701 - 94738 (+)
Gene ID: k141_286700_94
Type: CAZyme
Location: 95000 - 96439 (-)
Type: CAZyme
Location: 95000 - 96439 (-)
Gene ID: k141_286700_95
Type: TC
Location: 96506 - 98281 (-)
Type: TC
Location: 96506 - 98281 (-)
Gene ID: k141_286700_96
Type: TF
Location: 98609 - 99643 (+)
Type: TF
Location: 98609 - 99643 (+)
Gene ID: k141_286700_97
Type: TC
Location: 99858 - 100196 (+)
Type: TC
Location: 99858 - 100196 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.