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Cluster: KY171_112_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_462893 k141_462893_3 856 2625 + 2.A.58.2.2
TF k141_462893 k141_462893_4 2689 3378 + Trans_reg_C
STP k141_462893 k141_462893_5 3401 4723 + HATPase_c | HisKA
CAZyme k141_462893 k141_462893_6 4861 6030 + GH8
CAZyme k141_462893 k141_462893_7 6056 7750 + CE17
CAZyme k141_462893 k141_462893_8 7778 10657 + GH115
CAZyme k141_462893 k141_462893_9 10699 12234 + CBM91 | GH43_12
TC k141_462893 k141_462893_10 12334 13659 - 9.A.40.2.1
Gene ID: k141_462893_3
Type: TC
Location: 856 - 2625 (+)
Gene ID: k141_462893_4
Type: TF
Location: 2689 - 3378 (+)
Gene ID: k141_462893_5
Type: STP
Location: 3401 - 4723 (+)
Gene ID: k141_462893_6
Type: CAZyme
Location: 4861 - 6030 (+)
Gene ID: k141_462893_7
Type: CAZyme
Location: 6056 - 7750 (+)
Gene ID: k141_462893_8
Type: CAZyme
Location: 7778 - 10657 (+)
Gene ID: k141_462893_9
Type: CAZyme
Location: 10699 - 12234 (+)
Gene ID: k141_462893_10
Type: TC
Location: 12334 - 13659 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Acetatifactor
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_462893_10 vegetarian > omnivore 1.18587 0.01560

🧭 Explore Read Mapping of CGC

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