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Cluster: KY171_112_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_404175 k141_404175_1 3 2762 + GH25
pfam k141_404175 k141_404175_2 2889 3971 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
pfam k141_404175 k141_404175_3 4059 4928 + NTP_transferase | NTP_transf_3
CAZyme k141_404175 k141_404175_4 4918 6195 + GH25
pfam k141_404175 k141_404175_5 6250 6801 + dTDP_sugar_isom
NULL(UNKNOWN) k141_404175 k141_404175_6 6819 8312 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_404175 k141_404175_7 8357 9331 + 3.A.1.104.1
Gene ID: k141_404175_1
Type: CAZyme
Location: 3 - 2762 (+)
Gene ID: k141_404175_2
Type: pfam
Location: 2889 - 3971 (+)
Gene ID: k141_404175_3
Type: pfam
Location: 4059 - 4928 (+)
Gene ID: k141_404175_4
Type: CAZyme
Location: 4918 - 6195 (+)
Gene ID: k141_404175_5
Type: pfam
Location: 6250 - 6801 (+)
Gene ID: k141_404175_6
Type:
Location: 6819 - 8312 (+)
Gene ID: k141_404175_7
Type: TC
Location: 8357 - 9331 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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