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Cluster: KY171_112_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_185163 k141_185163_15 15258 16319 - GT28
pfam k141_185163 k141_185163_16 16359 16595 - TSCPD
TC k141_185163 k141_185163_17 17090 17704 - 9.B.28.1.8
CAZyme k141_185163 k141_185163_18 17723 19057 - GH28
TF k141_185163 k141_185163_19 19180 20094 - HTH_AraC | HTH_AraC
STP k141_185163 k141_185163_20 20432 21829 + SBP_bac_1
TC k141_185163 k141_185163_21 21926 22849 + 3.A.1.1.11
TC k141_185163 k141_185163_22 22862 23704 + 3.A.1.1.11
CAZyme k141_185163 k141_185163_23 23811 25367 + CBM91 | GH43_11
CAZyme k141_185163 k141_185163_24 25370 26794 + GH63
CAZyme k141_185163 k141_185163_25 26892 28271 + GH4
Gene ID: k141_185163_15
Type: CAZyme
Location: 15258 - 16319 (-)
Gene ID: k141_185163_16
Type: pfam
Location: 16359 - 16595 (-)
Gene ID: k141_185163_17
Type: TC
Location: 17090 - 17704 (-)
Gene ID: k141_185163_18
Type: CAZyme
Location: 17723 - 19057 (-)
Gene ID: k141_185163_19
Type: TF
Location: 19180 - 20094 (-)
Gene ID: k141_185163_20
Type: STP
Location: 20432 - 21829 (+)
Gene ID: k141_185163_21
Type: TC
Location: 21926 - 22849 (+)
Gene ID: k141_185163_22
Type: TC
Location: 22862 - 23704 (+)
Gene ID: k141_185163_23
Type: CAZyme
Location: 23811 - 25367 (+)
Gene ID: k141_185163_24
Type: CAZyme
Location: 25370 - 26794 (+)
Gene ID: k141_185163_25
Type: CAZyme
Location: 26892 - 28271 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Acetatifactor
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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