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Cluster: KY154_117_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_169149 k141_169149_84 84243 85169 - GT2
pfam k141_169149 k141_169149_85 85227 86546 - LytR_cpsA_psr
TC k141_169149 k141_169149_86 86655 88064 - 9.B.18.1.1
CAZyme k141_169149 k141_169149_87 88078 89040 - GT2
CAZyme k141_169149 k141_169149_88 89037 90422 - GT2
pfam k141_169149 k141_169149_89 90453 92174 - PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
CAZyme k141_169149 k141_169149_90 92240 94210 - GT2 | GT2
CAZyme k141_169149 k141_169149_91 94226 96394 - GT2
pfam k141_169149 k141_169149_92 96424 98490 - Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
TC k141_169149 k141_169149_93 98518 99759 - 3.A.1.103.6
TC k141_169149 k141_169149_94 99789 100793 - 3.A.1.104.1
Gene ID: k141_169149_84
Type: CAZyme
Location: 84243 - 85169 (-)
Gene ID: k141_169149_85
Type: pfam
Location: 85227 - 86546 (-)
Gene ID: k141_169149_86
Type: TC
Location: 86655 - 88064 (-)
Gene ID: k141_169149_87
Type: CAZyme
Location: 88078 - 89040 (-)
Gene ID: k141_169149_88
Type: CAZyme
Location: 89037 - 90422 (-)
Gene ID: k141_169149_89
Type: pfam
Location: 90453 - 92174 (-)
Gene ID: k141_169149_90
Type: CAZyme
Location: 92240 - 94210 (-)
Gene ID: k141_169149_91
Type: CAZyme
Location: 94226 - 96394 (-)
Gene ID: k141_169149_92
Type: pfam
Location: 96424 - 98490 (-)
Gene ID: k141_169149_93
Type: TC
Location: 98518 - 99759 (-)
Gene ID: k141_169149_94
Type: TC
Location: 99789 - 100793 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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