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Cluster: KY154_117_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_169149 k141_169149_43 39367 40149 - CE4
pfam k141_169149 k141_169149_44 40225 41172 - SBF | Mem_trans
pfam k141_169149 k141_169149_45 41166 41906 - YlmH_RBD
CAZyme k141_169149 k141_169149_46 42017 43855 + GH2
TC k141_169149 k141_169149_47 43852 45210 - 2.A.66.1.33
pfam k141_169149 k141_169149_48 45335 46552 - Acetyltransf_9 | SCP2_2
pfam k141_169149 k141_169149_49 46557 48188 - DUF3502
TC k141_169149 k141_169149_50 48268 49188 - 3.A.1.1.9
TC k141_169149 k141_169149_51 49205 50131 - 3.A.1.1.29
TF k141_169149 k141_169149_52 50311 51078 - HTH_AraC
STP k141_169149 k141_169149_53 51093 52391 - SBP_bac_1
TC k141_169149 k141_169149_54 52388 54142 - 9.B.33.1.1
pfam k141_169149 k141_169149_55 54285 55694 - PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
CAZyme k141_169149 k141_169149_56 55713 58118 - GH94
sulfatase k141_169149 k141_169149_57 58313 59044 + S1_9
CAZyme k141_169149 k141_169149_58 59067 60194 + CE9
TC k141_169149 k141_169149_59 60212 60889 - 9.B.20.1.4
NULL(UNKNOWN) k141_169149 k141_169149_60 60918 61739 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_169149 k141_169149_61 61733 62434 - 3.A.1.132.6
Gene ID: k141_169149_43
Type: CAZyme
Location: 39367 - 40149 (-)
Gene ID: k141_169149_44
Type: pfam
Location: 40225 - 41172 (-)
Gene ID: k141_169149_45
Type: pfam
Location: 41166 - 41906 (-)
Gene ID: k141_169149_46
Type: CAZyme
Location: 42017 - 43855 (+)
Gene ID: k141_169149_47
Type: TC
Location: 43852 - 45210 (-)
Gene ID: k141_169149_48
Type: pfam
Location: 45335 - 46552 (-)
Gene ID: k141_169149_49
Type: pfam
Location: 46557 - 48188 (-)
Gene ID: k141_169149_50
Type: TC
Location: 48268 - 49188 (-)
Gene ID: k141_169149_51
Type: TC
Location: 49205 - 50131 (-)
Gene ID: k141_169149_52
Type: TF
Location: 50311 - 51078 (-)
Gene ID: k141_169149_53
Type: STP
Location: 51093 - 52391 (-)
Gene ID: k141_169149_54
Type: TC
Location: 52388 - 54142 (-)
Gene ID: k141_169149_55
Type: pfam
Location: 54285 - 55694 (-)
Gene ID: k141_169149_56
Type: CAZyme
Location: 55713 - 58118 (-)
Gene ID: k141_169149_57
Type: sulfatase
Location: 58313 - 59044 (+)
Gene ID: k141_169149_58
Type: CAZyme
Location: 59067 - 60194 (+)
Gene ID: k141_169149_59
Type: TC
Location: 60212 - 60889 (-)
Gene ID: k141_169149_60
Type:
Location: 60918 - 61739 (-)
Gene ID: k141_169149_61
Type: TC
Location: 61733 - 62434 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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