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Cluster: KY151_119_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_325046 k141_325046_25 26079 28070 - 9.B.14.1.7
pfam k141_325046 k141_325046_26 28332 28802 - CcmE
pfam k141_325046 k141_325046_27 28876 29064 - CcmD
TC k141_325046 k141_325046_28 29061 29789 - 9.B.14.2.4
TC k141_325046 k141_325046_29 29839 30507 - 3.A.1.107.4
TC k141_325046 k141_325046_30 30530 31240 - 3.A.1.107.3
NULL(UNKNOWN) k141_325046 k141_325046_31 31678 32076 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_325046 k141_325046_32 32106 34181 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_5 | UvrC_RNaseH
TC k141_325046 k141_325046_33 34178 34870 + 4.F.1.1.8
NULL(UNKNOWN) k141_325046 k141_325046_34 35016 37943 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_325046 k141_325046_35 37952 39124 + GT104
Gene ID: k141_325046_25
Type: TC
Location: 26079 - 28070 (-)
Gene ID: k141_325046_26
Type: pfam
Location: 28332 - 28802 (-)
Gene ID: k141_325046_27
Type: pfam
Location: 28876 - 29064 (-)
Gene ID: k141_325046_28
Type: TC
Location: 29061 - 29789 (-)
Gene ID: k141_325046_29
Type: TC
Location: 29839 - 30507 (-)
Gene ID: k141_325046_30
Type: TC
Location: 30530 - 31240 (-)
Gene ID: k141_325046_31
Type:
Location: 31678 - 32076 (+)
Gene ID: k141_325046_32
Type: pfam
Location: 32106 - 34181 (+)
Gene ID: k141_325046_33
Type: TC
Location: 34178 - 34870 (+)
Gene ID: k141_325046_34
Type:
Location: 35016 - 37943 (+)
Gene ID: k141_325046_35
Type: CAZyme
Location: 37952 - 39124 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_325046_26 vegan > omnivore 1.39370 0.03641
k141_325046_26 vegetarian > omnivore 2.04117 0.02024
k141_325046_27 vegetarian > omnivore 1.10167 0.02024

🧭 Explore Read Mapping of CGC

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