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Cluster: KY150_51_sub_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_228398 k141_228398_1 1384 2850 - 2.A.1.1.3
pfam k141_228398 k141_228398_2 2863 4176 - AP_endonuc_2
pfam k141_228398 k141_228398_3 4209 5690 - FGGY_N | FGGY_C
CAZyme k141_228398 k141_228398_4 5831 8359 - GH9
CAZyme k141_228398 k141_228398_5 8372 9955 - CBM91 | GH43_10
CAZyme k141_228398 k141_228398_6 9980 11299 - GH43_2
CAZyme k141_228398 k141_228398_7 11308 13470 - CE1 | CE6
pfam k141_228398 k141_228398_8 13618 15405 - SusD_RagB | SusD-like_3
TC k141_228398 k141_228398_9 15418 18534 - 1.B.14.6.1
TF k141_228398 k141_228398_10 18730 22737 - HTH_AraC | HTH_AraC
TC k141_228398 k141_228398_11 22815 24017 + 9.B.10.1.1
TC k141_228398 k141_228398_12 24052 25401 - 9.B.145.1.2
Gene ID: k141_228398_1
Type: TC
Location: 1384 - 2850 (-)
Gene ID: k141_228398_2
Type: pfam
Location: 2863 - 4176 (-)
Gene ID: k141_228398_3
Type: pfam
Location: 4209 - 5690 (-)
Gene ID: k141_228398_4
Type: CAZyme
Location: 5831 - 8359 (-)
Gene ID: k141_228398_5
Type: CAZyme
Location: 8372 - 9955 (-)
Gene ID: k141_228398_6
Type: CAZyme
Location: 9980 - 11299 (-)
Gene ID: k141_228398_7
Type: CAZyme
Location: 11308 - 13470 (-)
Gene ID: k141_228398_8
Type: pfam
Location: 13618 - 15405 (-)
Gene ID: k141_228398_9
Type: TC
Location: 15418 - 18534 (-)
Gene ID: k141_228398_10
Type: TF
Location: 18730 - 22737 (-)
Gene ID: k141_228398_11
Type: TC
Location: 22815 - 24017 (+)
Gene ID: k141_228398_12
Type: TC
Location: 24052 - 25401 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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