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Cluster: KY117_24_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_25964 k141_25964_15 15408 16391 - GH179
STP k141_25964 k141_25964_16 16534 17313 - NUDIX
TC k141_25964 k141_25964_17 17523 18896 + 2.A.62.1.3
pfam k141_25964 k141_25964_18 18992 19969 + PFK
TC k141_25964 k141_25964_19 20100 21626 + 3.A.2.1.2
pfam k141_25964 k141_25964_20 21658 21900 + ATP-synt_DE_N
NULL(UNKNOWN) k141_25964 k141_25964_21 21916 22344 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_25964 k141_25964_22 22351 23406 + 3.A.2.1.7
TC k141_25964 k141_25964_23 23455 23697 + 3.A.2.1.6
pfam k141_25964 k141_25964_24 23749 24267 + ATP-synt_B | YMF19
pfam k141_25964 k141_25964_25 24277 24810 + OSCP
TC k141_25964 k141_25964_26 24831 26417 + 3.A.2.1.3
TC k141_25964 k141_25964_27 26424 27398 + 3.A.2.1.1
TC k141_25964 k141_25964_28 27673 28041 + 1.E.14.1.13
TC k141_25964 k141_25964_29 28093 28785 + 2.A.122.1.5
Gene ID: k141_25964_15
Type: CAZyme
Location: 15408 - 16391 (-)
Gene ID: k141_25964_16
Type: STP
Location: 16534 - 17313 (-)
Gene ID: k141_25964_17
Type: TC
Location: 17523 - 18896 (+)
Gene ID: k141_25964_18
Type: pfam
Location: 18992 - 19969 (+)
Gene ID: k141_25964_19
Type: TC
Location: 20100 - 21626 (+)
Gene ID: k141_25964_20
Type: pfam
Location: 21658 - 21900 (+)
Gene ID: k141_25964_21
Type:
Location: 21916 - 22344 (+)
Gene ID: k141_25964_22
Type: TC
Location: 22351 - 23406 (+)
Gene ID: k141_25964_23
Type: TC
Location: 23455 - 23697 (+)
Gene ID: k141_25964_24
Type: pfam
Location: 23749 - 24267 (+)
Gene ID: k141_25964_25
Type: pfam
Location: 24277 - 24810 (+)
Gene ID: k141_25964_26
Type: TC
Location: 24831 - 26417 (+)
Gene ID: k141_25964_27
Type: TC
Location: 26424 - 27398 (+)
Gene ID: k141_25964_28
Type: TC
Location: 27673 - 28041 (+)
Gene ID: k141_25964_29
Type: TC
Location: 28093 - 28785 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_25964_23 vegetarian > omnivore 1.13336 0.04957

🧭 Explore Read Mapping of CGC

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