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Cluster: KY112_42_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_165007 k141_165007_35 39293 40327 + 2.A.25.1.9
NULL(UNKNOWN) k141_165007 k141_165007_36 40324 40506 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_165007 k141_165007_37 40625 41053 + S-methyl_trans
CAZyme k141_165007 k141_165007_38 41126 42064 - GT2
CAZyme k141_165007 k141_165007_39 42051 43736 - GT83
TC k141_165007 k141_165007_40 43857 44711 - 2.A.7.3.26
pfam k141_165007 k141_165007_41 44859 45467 + CoaE
CAZyme k141_165007 k141_165007_42 45480 46055 + GH23
Gene ID: k141_165007_35
Type: TC
Location: 39293 - 40327 (+)
Gene ID: k141_165007_36
Type:
Location: 40324 - 40506 (+)
Gene ID: k141_165007_37
Type: pfam
Location: 40625 - 41053 (+)
Gene ID: k141_165007_38
Type: CAZyme
Location: 41126 - 42064 (-)
Gene ID: k141_165007_39
Type: CAZyme
Location: 42051 - 43736 (-)
Gene ID: k141_165007_40
Type: TC
Location: 43857 - 44711 (-)
Gene ID: k141_165007_41
Type: pfam
Location: 44859 - 45467 (+)
Gene ID: k141_165007_42
Type: CAZyme
Location: 45480 - 46055 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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