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Cluster: KY106_bin.38_sub_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_214745 k141_214745_2 173 2026 + 3.A.16.1.2
CAZyme k141_214745 k141_214745_3 2349 4487 + CBM34 | GH13_39
pfam k141_214745 k141_214745_4 4487 5671 + MFS_1
pfam k141_214745 k141_214745_5 6068 6937 + F_bP_aldolase
TC k141_214745 k141_214745_6 7256 8533 + 3.A.1.1.45
TC k141_214745 k141_214745_7 8710 9564 + 3.A.1.1.45
TC k141_214745 k141_214745_8 9564 10400 + 3.A.1.1.45
TF k141_214745 k141_214745_9 10573 12117 + HTH_AraC | HTH_AraC
TC k141_214745 k141_214745_10 12128 13894 + 9.B.33.1.1
TC k141_214745 k141_214745_11 13901 15610 + 3.A.1.1.9
Gene ID: k141_214745_2
Type: TC
Location: 173 - 2026 (+)
Gene ID: k141_214745_3
Type: CAZyme
Location: 2349 - 4487 (+)
Gene ID: k141_214745_4
Type: pfam
Location: 4487 - 5671 (+)
Gene ID: k141_214745_5
Type: pfam
Location: 6068 - 6937 (+)
Gene ID: k141_214745_6
Type: TC
Location: 7256 - 8533 (+)
Gene ID: k141_214745_7
Type: TC
Location: 8710 - 9564 (+)
Gene ID: k141_214745_8
Type: TC
Location: 9564 - 10400 (+)
Gene ID: k141_214745_9
Type: TF
Location: 10573 - 12117 (+)
Gene ID: k141_214745_10
Type: TC
Location: 12128 - 13894 (+)
Gene ID: k141_214745_11
Type: TC
Location: 13901 - 15610 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_214745_9 vegan > omnivore 1.02892 0.00701

🧭 Explore Read Mapping of CGC

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