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Cluster: KY106_bin.38_sub_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_102212 k141_102212_1 3 965 - 3.A.1.1.27
pfam k141_102212 k141_102212_2 1050 2315 - SBP_bac_8
TF k141_102212 k141_102212_3 2575 3579 - LacI
CAZyme k141_102212 k141_102212_4 3705 6836 - GH2
TC k141_102212 k141_102212_5 6999 7826 - 3.A.1.1.4
TC k141_102212 k141_102212_6 7819 8718 - 3.A.1.1.4
TC k141_102212 k141_102212_7 8890 10176 - 3.A.1.1.4
Gene ID: k141_102212_1
Type: TC
Location: 3 - 965 (-)
Gene ID: k141_102212_2
Type: pfam
Location: 1050 - 2315 (-)
Gene ID: k141_102212_3
Type: TF
Location: 2575 - 3579 (-)
Gene ID: k141_102212_4
Type: CAZyme
Location: 3705 - 6836 (-)
Gene ID: k141_102212_5
Type: TC
Location: 6999 - 7826 (-)
Gene ID: k141_102212_6
Type: TC
Location: 7819 - 8718 (-)
Gene ID: k141_102212_7
Type: TC
Location: 8890 - 10176 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_102212_1 vegan > omnivore 1.91328 0.00701
k141_102212_2 vegan > omnivore 1.55662 0.00701
k141_102212_5 vegan > omnivore 1.05459 0.00701
k141_102212_6 vegan > omnivore 1.16136 0.00701
k141_102212_7 vegan > omnivore 1.26804 0.00701

🧭 Explore Read Mapping of CGC

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