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Cluster: KY106_bin.38_sub_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_286925 k141_286925_11 10555 11985 + CE20
CAZyme k141_286925 k141_286925_12 12052 13479 + GH29
STP k141_286925 k141_286925_13 13548 15200 - SBP_bac_1
TF k141_286925 k141_286925_14 15193 15972 - HTH_AraC | HTH_AraC
TC k141_286925 k141_286925_15 16015 17856 - 8.A.59.2.1
TC k141_286925 k141_286925_16 18078 19034 + 3.A.1.1.10
TC k141_286925 k141_286925_17 19047 19952 + 3.A.1.1.29
NULL(UNKNOWN) k141_286925 k141_286925_18 20051 21760 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_286925 k141_286925_19 21965 23230 + CBM67
Gene ID: k141_286925_11
Type: CAZyme
Location: 10555 - 11985 (+)
Gene ID: k141_286925_12
Type: CAZyme
Location: 12052 - 13479 (+)
Gene ID: k141_286925_13
Type: STP
Location: 13548 - 15200 (-)
Gene ID: k141_286925_14
Type: TF
Location: 15193 - 15972 (-)
Gene ID: k141_286925_15
Type: TC
Location: 16015 - 17856 (-)
Gene ID: k141_286925_16
Type: TC
Location: 18078 - 19034 (+)
Gene ID: k141_286925_17
Type: TC
Location: 19047 - 19952 (+)
Gene ID: k141_286925_18
Type:
Location: 20051 - 21760 (+)
Gene ID: k141_286925_19
Type: CAZyme
Location: 21965 - 23230 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_286925_16 vegan > omnivore 1.06282 0.00701

🧭 Explore Read Mapping of CGC

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