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Cluster: KY106_bin.38_sub_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_56317 k141_56317_35 38794 40368 + GH25
pfam k141_56317 k141_56317_36 40443 40997 + dTDP_sugar_isom
TC k141_56317 k141_56317_37 41008 41823 + 3.A.1.104.1
TC k141_56317 k141_56317_38 41849 43117 + 3.A.1.103.6
pfam k141_56317 k141_56317_39 43121 44047 + PCMT | MTS | NodS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
NULL(UNKNOWN) k141_56317 k141_56317_40 44047 45297 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_56317 k141_56317_41 45299 47776 + GT2 | GT2
peptidase k141_56317 k141_56317_42 47873 49129 - S11.UPW
CAZyme k141_56317 k141_56317_43 49336 51207 + GT2 | GT2
CAZyme k141_56317 k141_56317_44 51217 52173 + GT2
TC k141_56317 k141_56317_45 52287 53723 + 9.B.18.1.1
pfam k141_56317 k141_56317_46 53738 55000 + LytR_cpsA_psr
CAZyme k141_56317 k141_56317_47 55100 56029 + GT2
Gene ID: k141_56317_35
Type: CAZyme
Location: 38794 - 40368 (+)
Gene ID: k141_56317_36
Type: pfam
Location: 40443 - 40997 (+)
Gene ID: k141_56317_37
Type: TC
Location: 41008 - 41823 (+)
Gene ID: k141_56317_38
Type: TC
Location: 41849 - 43117 (+)
Gene ID: k141_56317_39
Type: pfam
Location: 43121 - 44047 (+)
Gene ID: k141_56317_40
Type:
Location: 44047 - 45297 (+)
Gene ID: k141_56317_41
Type: CAZyme
Location: 45299 - 47776 (+)
Gene ID: k141_56317_42
Type: peptidase
Location: 47873 - 49129 (-)
Gene ID: k141_56317_43
Type: CAZyme
Location: 49336 - 51207 (+)
Gene ID: k141_56317_44
Type: CAZyme
Location: 51217 - 52173 (+)
Gene ID: k141_56317_45
Type: TC
Location: 52287 - 53723 (+)
Gene ID: k141_56317_46
Type: pfam
Location: 53738 - 55000 (+)
Gene ID: k141_56317_47
Type: CAZyme
Location: 55100 - 56029 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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