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Cluster: KY101_bin.47_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_166495 k141_166495_2 2257 3039 - 3.A.1.3.2
TC k141_166495 k141_166495_3 3223 4653 - 2.A.25.1.4
TC k141_166495 k141_166495_4 5123 6976 - 3.A.1.135.6
TC k141_166495 k141_166495_5 6966 9290 - 3.A.1.135.6
TF k141_166495 k141_166495_6 9283 9774 - MarR
TC k141_166495 k141_166495_7 10116 11114 - 2.A.85.5.1
pfam k141_166495 k141_166495_8 11120 11746 - Fumerase_C
pfam k141_166495 k141_166495_9 11746 12645 - Fumerase
TC k141_166495 k141_166495_10 12695 13960 - 2.A.47.5.2
TF k141_166495 k141_166495_11 14139 14783 - GntR
TF k141_166495 k141_166495_12 14770 15354 - GntR
CAZyme k141_166495 k141_166495_13 15457 18768 - GH53
Gene ID: k141_166495_2
Type: TC
Location: 2257 - 3039 (-)
Gene ID: k141_166495_3
Type: TC
Location: 3223 - 4653 (-)
Gene ID: k141_166495_4
Type: TC
Location: 5123 - 6976 (-)
Gene ID: k141_166495_5
Type: TC
Location: 6966 - 9290 (-)
Gene ID: k141_166495_6
Type: TF
Location: 9283 - 9774 (-)
Gene ID: k141_166495_7
Type: TC
Location: 10116 - 11114 (-)
Gene ID: k141_166495_8
Type: pfam
Location: 11120 - 11746 (-)
Gene ID: k141_166495_9
Type: pfam
Location: 11746 - 12645 (-)
Gene ID: k141_166495_10
Type: TC
Location: 12695 - 13960 (-)
Gene ID: k141_166495_11
Type: TF
Location: 14139 - 14783 (-)
Gene ID: k141_166495_12
Type: TF
Location: 14770 - 15354 (-)
Gene ID: k141_166495_13
Type: CAZyme
Location: 15457 - 18768 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_166495_8 vegan > omnivore 1.28120 0.01097
k141_166495_10 vegan > omnivore 1.08081 0.00861

🧭 Explore Read Mapping of CGC

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