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Cluster: KY080_31_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_93178 k141_93178_28 28542 30587 - 3.A.11.1.3
TC k141_93178 k141_93178_29 30762 31769 + 2.A.98.1.3
pfam k141_93178 k141_93178_30 31847 32617 - Shikimate_dh_N
pfam k141_93178 k141_93178_31 32658 33464 - RadC | UPF0758_N
CAZyme k141_93178 k141_93178_32 33483 34496 - GT2
Gene ID: k141_93178_28
Type: TC
Location: 28542 - 30587 (-)
Gene ID: k141_93178_29
Type: TC
Location: 30762 - 31769 (+)
Gene ID: k141_93178_30
Type: pfam
Location: 31847 - 32617 (-)
Gene ID: k141_93178_31
Type: pfam
Location: 32658 - 33464 (-)
Gene ID: k141_93178_32
Type: CAZyme
Location: 33483 - 34496 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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