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Cluster: KY080_31_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_139509 k141_139509_11 11671 14043 + GH43
CAZyme k141_139509 k141_139509_12 14133 16142 + GH43_3
CAZyme k141_139509 k141_139509_13 16191 18044 + GH43_3
TF k141_139509 k141_139509_14 18056 18610 + GerE
STP k141_139509 k141_139509_15 18652 19665 + FecR
TC k141_139509 k141_139509_16 19713 23237 + 1.B.14.6.1
pfam k141_139509 k141_139509_17 23268 25067 + SusD_RagB | SusD-like_3
CAZyme k141_139509 k141_139509_18 25189 26169 + GH43_3
CAZyme k141_139509 k141_139509_19 26227 28422 + GH3
CAZyme k141_139509 k141_139509_20 28442 31519 + GH182
CAZyme k141_139509 k141_139509_21 31609 33846 + GH36
CAZyme k141_139509 k141_139509_22 33843 37091 + GH2
NULL(UNKNOWN) k141_139509 k141_139509_23 37301 38419 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_139509 k141_139509_24 38410 39846 - TRAM | tRNA_U5-meth_tr | Methyltransf_15 | Methyltransf_31
TC k141_139509 k141_139509_25 40174 42891 + 4.A.2.1.17
Gene ID: k141_139509_11
Type: CAZyme
Location: 11671 - 14043 (+)
Gene ID: k141_139509_12
Type: CAZyme
Location: 14133 - 16142 (+)
Gene ID: k141_139509_13
Type: CAZyme
Location: 16191 - 18044 (+)
Gene ID: k141_139509_14
Type: TF
Location: 18056 - 18610 (+)
Gene ID: k141_139509_15
Type: STP
Location: 18652 - 19665 (+)
Gene ID: k141_139509_16
Type: TC
Location: 19713 - 23237 (+)
Gene ID: k141_139509_17
Type: pfam
Location: 23268 - 25067 (+)
Gene ID: k141_139509_18
Type: CAZyme
Location: 25189 - 26169 (+)
Gene ID: k141_139509_19
Type: CAZyme
Location: 26227 - 28422 (+)
Gene ID: k141_139509_20
Type: CAZyme
Location: 28442 - 31519 (+)
Gene ID: k141_139509_21
Type: CAZyme
Location: 31609 - 33846 (+)
Gene ID: k141_139509_22
Type: CAZyme
Location: 33843 - 37091 (+)
Gene ID: k141_139509_23
Type:
Location: 37301 - 38419 (+)
Gene ID: k141_139509_24
Type: pfam
Location: 38410 - 39846 (-)
Gene ID: k141_139509_25
Type: TC
Location: 40174 - 42891 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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