Cluster: KY078_maxbin.016_CGC15
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: KY078_maxbin.016
- CGC Family ID: CGCFAM_00019
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_120862 | k141_120862_157 | 191238 | 191954 | - | 9.B.143.2.3 |
| pfam | k141_120862 | k141_120862_158 | 192208 | 194343 | + | Radical_SAM_N | DUF3362 |
| peptidase | k141_120862 | k141_120862_159 | 194340 | 195251 | - | G05.UPW |
| TC | k141_120862 | k141_120862_160 | 195367 | 196743 | - | 3.A.1.17.10 |
| NULL(UNKNOWN) | k141_120862 | k141_120862_161 | 196747 | 197796 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_120862 | k141_120862_162 | 197799 | 199610 | - | 3.D.1.5.1 |
| STP | k141_120862 | k141_120862_163 | 199604 | 201436 | - | Pyr_redox_2 |
| CAZyme | k141_120862 | k141_120862_164 | 201693 | 203075 | - | GH4 |
| TC | k141_120862 | k141_120862_165 | 203079 | 204695 | - | 4.A.1.1.3 |
| pfam | k141_120862 | k141_120862_166 | 204795 | 205661 | - | PRD | PRD | CAT_RBD |
| TC | k141_120862 | k141_120862_167 | 205668 | 206180 | - | 4.A.1.2.5 |
| TC | k141_120862 | k141_120862_168 | 206555 | 208807 | - | 1.I.1.1.3 |
| TC | k141_120862 | k141_120862_169 | 209302 | 211716 | + | 3.A.3.5.15 |
Gene ID: k141_120862_157
Type: TC
Location: 191238 - 191954 (-)
Type: TC
Location: 191238 - 191954 (-)
Gene ID: k141_120862_158
Type: pfam
Location: 192208 - 194343 (+)
Type: pfam
Location: 192208 - 194343 (+)
Gene ID: k141_120862_159
Type: peptidase
Location: 194340 - 195251 (-)
Type: peptidase
Location: 194340 - 195251 (-)
Gene ID: k141_120862_160
Type: TC
Location: 195367 - 196743 (-)
Type: TC
Location: 195367 - 196743 (-)
Gene ID: k141_120862_161
Type:
Location: 196747 - 197796 (-)
Type:
Location: 196747 - 197796 (-)
Gene ID: k141_120862_162
Type: TC
Location: 197799 - 199610 (-)
Type: TC
Location: 197799 - 199610 (-)
Gene ID: k141_120862_163
Type: STP
Location: 199604 - 201436 (-)
Type: STP
Location: 199604 - 201436 (-)
Gene ID: k141_120862_164
Type: CAZyme
Location: 201693 - 203075 (-)
Type: CAZyme
Location: 201693 - 203075 (-)
Gene ID: k141_120862_165
Type: TC
Location: 203079 - 204695 (-)
Type: TC
Location: 203079 - 204695 (-)
Gene ID: k141_120862_166
Type: pfam
Location: 204795 - 205661 (-)
Type: pfam
Location: 204795 - 205661 (-)
Gene ID: k141_120862_167
Type: TC
Location: 205668 - 206180 (-)
Type: TC
Location: 205668 - 206180 (-)
Gene ID: k141_120862_168
Type: TC
Location: 206555 - 208807 (-)
Type: TC
Location: 206555 - 208807 (-)
Gene ID: k141_120862_169
Type: TC
Location: 209302 - 211716 (+)
Type: TC
Location: 209302 - 211716 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp958437495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.