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Cluster: KY063_14_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_29396 k141_29396_26 29593 30723 + GT2
pfam k141_29396 k141_29396_27 30841 31947 + GLF | NAD_binding_8
CAZyme k141_29396 k141_29396_28 31969 33138 + GT2
CAZyme k141_29396 k141_29396_29 33131 34090 + GT2
TC k141_29396 k141_29396_30 34200 35558 + 2.A.38.4.1
TC k141_29396 k141_29396_31 35738 36385 + 2.A.38.4.3
TC k141_29396 k141_29396_32 36549 39182 - 4.A.2.1.17
pfam k141_29396 k141_29396_33 39401 40780 + Hexapep | Hexapep | NTP_transferase | NTP_transf_3
TF k141_29396 k141_29396_34 41021 42604 + HTH_AraC
TC k141_29396 k141_29396_35 42597 44324 + 8.A.59.2.1
TC k141_29396 k141_29396_36 44314 45300 + 3.A.1.2.9
TC k141_29396 k141_29396_37 45562 46659 + 3.A.1.2.3
TC k141_29396 k141_29396_38 46794 48329 + 3.A.1.2.3
TC k141_29396 k141_29396_39 48343 49434 + 3.A.1.2.3
pfam k141_29396 k141_29396_40 49476 49847 + Flg_new
TC k141_29396 k141_29396_41 49860 50852 + 8.A.5.1.3
Gene ID: k141_29396_26
Type: CAZyme
Location: 29593 - 30723 (+)
Gene ID: k141_29396_27
Type: pfam
Location: 30841 - 31947 (+)
Gene ID: k141_29396_28
Type: CAZyme
Location: 31969 - 33138 (+)
Gene ID: k141_29396_29
Type: CAZyme
Location: 33131 - 34090 (+)
Gene ID: k141_29396_30
Type: TC
Location: 34200 - 35558 (+)
Gene ID: k141_29396_31
Type: TC
Location: 35738 - 36385 (+)
Gene ID: k141_29396_32
Type: TC
Location: 36549 - 39182 (-)
Gene ID: k141_29396_33
Type: pfam
Location: 39401 - 40780 (+)
Gene ID: k141_29396_34
Type: TF
Location: 41021 - 42604 (+)
Gene ID: k141_29396_35
Type: TC
Location: 42597 - 44324 (+)
Gene ID: k141_29396_36
Type: TC
Location: 44314 - 45300 (+)
Gene ID: k141_29396_37
Type: TC
Location: 45562 - 46659 (+)
Gene ID: k141_29396_38
Type: TC
Location: 46794 - 48329 (+)
Gene ID: k141_29396_39
Type: TC
Location: 48343 - 49434 (+)
Gene ID: k141_29396_40
Type: pfam
Location: 49476 - 49847 (+)
Gene ID: k141_29396_41
Type: TC
Location: 49860 - 50852 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_29396_34 vegan > omnivore 1.56012 0.01332
k141_29396_34 vegetarian > omnivore 1.43554 0.00699
k141_29396_35 vegan > omnivore 2.32804 0.01332
k141_29396_35 vegetarian > omnivore 1.85497 0.00699
k141_29396_37 vegan > omnivore 2.12482 0.01332
k141_29396_37 vegetarian > omnivore 2.10991 0.00699
k141_29396_38 vegan > omnivore 1.95414 0.01332
k141_29396_38 vegetarian > omnivore 2.44256 0.00699
k141_29396_39 vegan > omnivore 2.32218 0.01332
k141_29396_39 vegetarian > omnivore 1.99519 0.00699

🧭 Explore Read Mapping of CGC

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