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Cluster: KY059_bin.88_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_398593 k141_398593_15 22969 23505 - 4.A.1.2.6
CAZyme k141_398593 k141_398593_16 23656 25104 - GH1
TF k141_398593 k141_398593_17 25277 26296 - HTH_AraC
CAZyme k141_398593 k141_398593_18 26515 29085 + GH106
TF k141_398593 k141_398593_19 29128 29982 + HTH_6
STP k141_398593 k141_398593_20 30193 30873 - Pribosyltran
TC k141_398593 k141_398593_21 31312 34080 + 3.A.3.4.1
sulfatase k141_398593 k141_398593_22 34220 35131 - S1_7
CAZyme k141_398593 k141_398593_23 35539 36852 - GH140
TC k141_398593 k141_398593_24 37063 38490 - 4.A.1.2.11
peptidase k141_398593 k141_398593_25 38981 40318 + S09.UPW
pfam k141_398593 k141_398593_26 40582 42093 + Sde182_NH-like
CAZyme k141_398593 k141_398593_27 42498 43928 - GH1
pfam k141_398593 k141_398593_28 44340 45248 - ROK
CAZyme k141_398593 k141_398593_29 45273 46760 - GH1
TC k141_398593 k141_398593_30 46846 47187 - 4.A.3.2.1
TC k141_398593 k141_398593_31 47190 47486 - 4.A.3.2.6
TC k141_398593 k141_398593_32 47535 48827 - 4.A.3.2.2
pfam k141_398593 k141_398593_33 48982 49749 - YdjC
TF k141_398593 k141_398593_34 50037 50858 + HTH_6
CAZyme k141_398593 k141_398593_35 50879 52267 - GH1
Gene ID: k141_398593_15
Type: TC
Location: 22969 - 23505 (-)
Gene ID: k141_398593_16
Type: CAZyme
Location: 23656 - 25104 (-)
Gene ID: k141_398593_17
Type: TF
Location: 25277 - 26296 (-)
Gene ID: k141_398593_18
Type: CAZyme
Location: 26515 - 29085 (+)
Gene ID: k141_398593_19
Type: TF
Location: 29128 - 29982 (+)
Gene ID: k141_398593_20
Type: STP
Location: 30193 - 30873 (-)
Gene ID: k141_398593_21
Type: TC
Location: 31312 - 34080 (+)
Gene ID: k141_398593_22
Type: sulfatase
Location: 34220 - 35131 (-)
Gene ID: k141_398593_23
Type: CAZyme
Location: 35539 - 36852 (-)
Gene ID: k141_398593_24
Type: TC
Location: 37063 - 38490 (-)
Gene ID: k141_398593_25
Type: peptidase
Location: 38981 - 40318 (+)
Gene ID: k141_398593_26
Type: pfam
Location: 40582 - 42093 (+)
Gene ID: k141_398593_27
Type: CAZyme
Location: 42498 - 43928 (-)
Gene ID: k141_398593_28
Type: pfam
Location: 44340 - 45248 (-)
Gene ID: k141_398593_29
Type: CAZyme
Location: 45273 - 46760 (-)
Gene ID: k141_398593_30
Type: TC
Location: 46846 - 47187 (-)
Gene ID: k141_398593_31
Type: TC
Location: 47190 - 47486 (-)
Gene ID: k141_398593_32
Type: TC
Location: 47535 - 48827 (-)
Gene ID: k141_398593_33
Type: pfam
Location: 48982 - 49749 (-)
Gene ID: k141_398593_34
Type: TF
Location: 50037 - 50858 (+)
Gene ID: k141_398593_35
Type: CAZyme
Location: 50879 - 52267 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_398593_22 vegetarian > vegan 1.58351 0.01560
k141_398593_23 vegetarian > vegan 1.10881 0.03025
k141_398593_25 vegetarian > vegan 1.06659 0.02616

🧭 Explore Read Mapping of CGC

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