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Cluster: KY048_bin.3_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_71969 k141_71969_11 10315 11109 - 3.A.1.34.1
TC k141_71969 k141_71969_12 11102 12025 - 3.A.1.34.1
TC k141_71969 k141_71969_13 12230 13210 - 3.A.1.34.1
NULL(UNKNOWN) k141_71969 k141_71969_14 13371 14156 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_71969 k141_71969_15 14415 15818 - tRNA-synt_2 | tRNA_anti-codon
TC k141_71969 k141_71969_16 16000 16563 - 4.A.1.2.6
peptidase k141_71969 k141_71969_17 16807 17706 + S09.UPW
TC k141_71969 k141_71969_18 18179 20539 + 9.A.8.1.6
TC k141_71969 k141_71969_19 20854 22518 + 4.A.1.1.3
TF k141_71969 k141_71969_20 22581 23333 - HTH_6
CAZyme k141_71969 k141_71969_21 23509 24882 + GH4
NULL(UNKNOWN) k141_71969 k141_71969_22 25048 25800 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_71969 k141_71969_23 25976 27172 + 2.A.1.2.18
CAZyme k141_71969 k141_71969_24 27326 28702 + GH13_20
Gene ID: k141_71969_11
Type: TC
Location: 10315 - 11109 (-)
Gene ID: k141_71969_12
Type: TC
Location: 11102 - 12025 (-)
Gene ID: k141_71969_13
Type: TC
Location: 12230 - 13210 (-)
Gene ID: k141_71969_14
Type:
Location: 13371 - 14156 (-)
Gene ID: k141_71969_15
Type: pfam
Location: 14415 - 15818 (-)
Gene ID: k141_71969_16
Type: TC
Location: 16000 - 16563 (-)
Gene ID: k141_71969_17
Type: peptidase
Location: 16807 - 17706 (+)
Gene ID: k141_71969_18
Type: TC
Location: 18179 - 20539 (+)
Gene ID: k141_71969_19
Type: TC
Location: 20854 - 22518 (+)
Gene ID: k141_71969_20
Type: TF
Location: 22581 - 23333 (-)
Gene ID: k141_71969_21
Type: CAZyme
Location: 23509 - 24882 (+)
Gene ID: k141_71969_22
Type:
Location: 25048 - 25800 (+)
Gene ID: k141_71969_23
Type: TC
Location: 25976 - 27172 (+)
Gene ID: k141_71969_24
Type: CAZyme
Location: 27326 - 28702 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_71969_19 vegan > omnivore 1.07517 0.02258
k141_71969_21 vegan > omnivore 1.67357 0.02258
k141_71969_22 vegan > omnivore 1.97308 0.02258

🧭 Explore Read Mapping of CGC

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