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Cluster: KY046_30_sub_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_146286 k141_146286_61 57076 58488 + GH1
TC k141_146286 k141_146286_62 58626 59936 + 3.D.6.1.2
TC k141_146286 k141_146286_63 59946 60875 + 3.D.6.1.2
TC k141_146286 k141_146286_64 60872 61492 + 3.D.6.1.2
TC k141_146286 k141_146286_65 61485 62180 + 3.D.6.1.2
TC k141_146286 k141_146286_66 62180 62752 + 3.D.6.1.2
TC k141_146286 k141_146286_67 62768 63553 + 3.D.6.1.3
pfam k141_146286 k141_146286_68 63578 64546 - ApbE
pfam k141_146286 k141_146286_69 64584 64937 + NusG_II
TC k141_146286 k141_146286_70 64906 65430 + 2.A.87.3.3
TC k141_146286 k141_146286_71 65508 66866 + 2.A.22.5.3
Gene ID: k141_146286_61
Type: CAZyme
Location: 57076 - 58488 (+)
Gene ID: k141_146286_62
Type: TC
Location: 58626 - 59936 (+)
Gene ID: k141_146286_63
Type: TC
Location: 59946 - 60875 (+)
Gene ID: k141_146286_64
Type: TC
Location: 60872 - 61492 (+)
Gene ID: k141_146286_65
Type: TC
Location: 61485 - 62180 (+)
Gene ID: k141_146286_66
Type: TC
Location: 62180 - 62752 (+)
Gene ID: k141_146286_67
Type: TC
Location: 62768 - 63553 (+)
Gene ID: k141_146286_68
Type: pfam
Location: 63578 - 64546 (-)
Gene ID: k141_146286_69
Type: pfam
Location: 64584 - 64937 (+)
Gene ID: k141_146286_70
Type: TC
Location: 64906 - 65430 (+)
Gene ID: k141_146286_71
Type: TC
Location: 65508 - 66866 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_146286_61 vegan > omnivore 1.05838 0.02913

🧭 Explore Read Mapping of CGC

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