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Cluster: KY045_90_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_250446 k141_250446_16 13430 14854 - 2.A.1.53.5
TC k141_250446 k141_250446_17 14990 16054 + 2.A.86.1.8
TC k141_250446 k141_250446_18 16083 17540 - 2.A.35.1.3
pfam k141_250446 k141_250446_19 17673 19091 - SusF_SusE
pfam k141_250446 k141_250446_20 19179 20447 - SusE
TC k141_250446 k141_250446_21 20469 22142 - 8.A.46.1.1
TC k141_250446 k141_250446_22 22162 25272 - 1.B.14.6.1
pfam k141_250446 k141_250446_23 25703 26284 - Lysine_decarbox | LDcluster4
CAZyme k141_250446 k141_250446_24 26360 27778 - GH13
pfam k141_250446 k141_250446_25 27822 28418 - RNase_HII
TC k141_250446 k141_250446_26 28434 30257 - 2.A.58.2.2
NULL(UNKNOWN) k141_250446 k141_250446_27 30361 30648 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_250446 k141_250446_28 30653 31657 - 3Beta_HSD | Epimerase | RmlD_sub_bind | NmrA | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd
CAZyme k141_250446 k141_250446_29 31669 33729 - GH13_8
Gene ID: k141_250446_16
Type: TC
Location: 13430 - 14854 (-)
Gene ID: k141_250446_17
Type: TC
Location: 14990 - 16054 (+)
Gene ID: k141_250446_18
Type: TC
Location: 16083 - 17540 (-)
Gene ID: k141_250446_19
Type: pfam
Location: 17673 - 19091 (-)
Gene ID: k141_250446_20
Type: pfam
Location: 19179 - 20447 (-)
Gene ID: k141_250446_21
Type: TC
Location: 20469 - 22142 (-)
Gene ID: k141_250446_22
Type: TC
Location: 22162 - 25272 (-)
Gene ID: k141_250446_23
Type: pfam
Location: 25703 - 26284 (-)
Gene ID: k141_250446_24
Type: CAZyme
Location: 26360 - 27778 (-)
Gene ID: k141_250446_25
Type: pfam
Location: 27822 - 28418 (-)
Gene ID: k141_250446_26
Type: TC
Location: 28434 - 30257 (-)
Gene ID: k141_250446_27
Type:
Location: 30361 - 30648 (-)
Gene ID: k141_250446_28
Type: pfam
Location: 30653 - 31657 (-)
Gene ID: k141_250446_29
Type: CAZyme
Location: 31669 - 33729 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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