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Cluster: KY044_bin.16_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_84428 k141_84428_23 26769 28220 - GH43_35
NULL(UNKNOWN) k141_84428 k141_84428_24 28250 28669 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_84428 k141_84428_25 28682 31711 - GH3
CAZyme k141_84428 k141_84428_26 31882 34299 - GH2
pfam k141_84428 k141_84428_27 34526 35860 - MatE | MatE
pfam k141_84428 k141_84428_28 35885 36622 - PseudoU_synth_1 | PseudoU_synth_1
TC k141_84428 k141_84428_29 36730 37533 - 3.A.1.25.4
TC k141_84428 k141_84428_30 37530 38417 - 3.A.1.26.7
TC k141_84428 k141_84428_31 38402 39253 - 3.A.1.26.7
Gene ID: k141_84428_23
Type: CAZyme
Location: 26769 - 28220 (-)
Gene ID: k141_84428_24
Type:
Location: 28250 - 28669 (-)
Gene ID: k141_84428_25
Type: CAZyme
Location: 28682 - 31711 (-)
Gene ID: k141_84428_26
Type: CAZyme
Location: 31882 - 34299 (-)
Gene ID: k141_84428_27
Type: pfam
Location: 34526 - 35860 (-)
Gene ID: k141_84428_28
Type: pfam
Location: 35885 - 36622 (-)
Gene ID: k141_84428_29
Type: TC
Location: 36730 - 37533 (-)
Gene ID: k141_84428_30
Type: TC
Location: 37530 - 38417 (-)
Gene ID: k141_84428_31
Type: TC
Location: 38402 - 39253 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_84428_24 vegan > omnivore 1.24979 0.00193
k141_84428_27 vegan > omnivore 1.62490 0.00193
k141_84428_27 vegetarian > omnivore 1.90817 0.00809

🧭 Explore Read Mapping of CGC

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