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Cluster: KY043_24_sub_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_172885 k141_172885_17 10701 11522 + GH166
NULL(UNKNOWN) k141_172885 k141_172885_18 11774 12199 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_172885 k141_172885_19 12352 13380 - LacI
TC k141_172885 k141_172885_20 13915 15354 + 3.A.1.1.33
TC k141_172885 k141_172885_21 15544 16461 + 3.A.1.1.23
TC k141_172885 k141_172885_22 16464 17315 + 3.A.1.1.18
TC k141_172885 k141_172885_23 17512 18573 - 3.A.15.2.1
pfam k141_172885 k141_172885_24 18589 19134 - CobU
TC k141_172885 k141_172885_25 19152 20198 - 9.B.34.1.3
TC k141_172885 k141_172885_26 20395 22218 + 8.A.59.2.2
Gene ID: k141_172885_17
Type: CAZyme
Location: 10701 - 11522 (+)
Gene ID: k141_172885_18
Type:
Location: 11774 - 12199 (+)
Gene ID: k141_172885_19
Type: TF
Location: 12352 - 13380 (-)
Gene ID: k141_172885_20
Type: TC
Location: 13915 - 15354 (+)
Gene ID: k141_172885_21
Type: TC
Location: 15544 - 16461 (+)
Gene ID: k141_172885_22
Type: TC
Location: 16464 - 17315 (+)
Gene ID: k141_172885_23
Type: TC
Location: 17512 - 18573 (-)
Gene ID: k141_172885_24
Type: pfam
Location: 18589 - 19134 (-)
Gene ID: k141_172885_25
Type: TC
Location: 19152 - 20198 (-)
Gene ID: k141_172885_26
Type: TC
Location: 20395 - 22218 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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