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Cluster: KY043_24_sub_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_166173 k141_166173_102 109914 110492 + 3.A.1.25.5
pfam k141_166173 k141_166173_103 110518 110856 + DUF1284
CAZyme k141_166173 k141_166173_104 110989 112464 + CBM91 | GH43_12
CAZyme k141_166173 k141_166173_105 112478 113749 + GH27
CAZyme k141_166173 k141_166173_106 113838 115181 + GH43_35
CAZyme k141_166173 k141_166173_107 115198 116367 + GH5_4
TF k141_166173 k141_166173_108 116637 117371 + HTH_AraC | HTH_AraC
TC k141_166173 k141_166173_109 117410 118474 - 8.A.59.4.2
TF k141_166173 k141_166173_110 118664 118972 - SpoVT_AbrB
TC k141_166173 k141_166173_111 119306 119923 + 9.B.156.3.1
TC k141_166173 k141_166173_112 119916 120437 + 9.B.156.3.1
pfam k141_166173 k141_166173_113 120418 121491 - Spore_GerAC
NULL(UNKNOWN) k141_166173 k141_166173_114 121488 122555 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_166173 k141_166173_115 122548 124059 - 9.A.11.1.2
Gene ID: k141_166173_102
Type: TC
Location: 109914 - 110492 (+)
Gene ID: k141_166173_103
Type: pfam
Location: 110518 - 110856 (+)
Gene ID: k141_166173_104
Type: CAZyme
Location: 110989 - 112464 (+)
Gene ID: k141_166173_105
Type: CAZyme
Location: 112478 - 113749 (+)
Gene ID: k141_166173_106
Type: CAZyme
Location: 113838 - 115181 (+)
Gene ID: k141_166173_107
Type: CAZyme
Location: 115198 - 116367 (+)
Gene ID: k141_166173_108
Type: TF
Location: 116637 - 117371 (+)
Gene ID: k141_166173_109
Type: TC
Location: 117410 - 118474 (-)
Gene ID: k141_166173_110
Type: TF
Location: 118664 - 118972 (-)
Gene ID: k141_166173_111
Type: TC
Location: 119306 - 119923 (+)
Gene ID: k141_166173_112
Type: TC
Location: 119916 - 120437 (+)
Gene ID: k141_166173_113
Type: pfam
Location: 120418 - 121491 (-)
Gene ID: k141_166173_114
Type:
Location: 121488 - 122555 (-)
Gene ID: k141_166173_115
Type: TC
Location: 122548 - 124059 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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