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Cluster: KY043_24_sub_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_166173 k141_166173_58 63369 65450 + 4.A.1.1.14
TF k141_166173 k141_166173_59 65732 66055 + HTH_3
pfam k141_166173 k141_166173_60 66170 67543 - tRNA-synt_2b | HGTP_anticodon
TC k141_166173 k141_166173_61 67711 68670 - 2.A.6.4.2
TC k141_166173 k141_166173_62 68663 70066 - 2.A.6.4.2
TC k141_166173 k141_166173_63 70386 71003 - 2.A.115.2.14
TC k141_166173 k141_166173_64 71016 71726 - 3.A.1.4.10
TC k141_166173 k141_166173_65 71740 72510 - 3.A.1.4.10
TC k141_166173 k141_166173_66 72507 73580 - 3.A.1.4.8
TC k141_166173 k141_166173_67 73593 74474 - 3.A.1.4.10
TC k141_166173 k141_166173_68 74658 75893 - 3.A.1.4.10
CAZyme k141_166173 k141_166173_69 76165 77118 - GH113
pfam k141_166173 k141_166173_70 77123 77770 - QueH
NULL(UNKNOWN) k141_166173 k141_166173_71 77773 77931 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_166173 k141_166173_72 78002 80005 - 9.A.8.1.6
Gene ID: k141_166173_58
Type: TC
Location: 63369 - 65450 (+)
Gene ID: k141_166173_59
Type: TF
Location: 65732 - 66055 (+)
Gene ID: k141_166173_60
Type: pfam
Location: 66170 - 67543 (-)
Gene ID: k141_166173_61
Type: TC
Location: 67711 - 68670 (-)
Gene ID: k141_166173_62
Type: TC
Location: 68663 - 70066 (-)
Gene ID: k141_166173_63
Type: TC
Location: 70386 - 71003 (-)
Gene ID: k141_166173_64
Type: TC
Location: 71016 - 71726 (-)
Gene ID: k141_166173_65
Type: TC
Location: 71740 - 72510 (-)
Gene ID: k141_166173_66
Type: TC
Location: 72507 - 73580 (-)
Gene ID: k141_166173_67
Type: TC
Location: 73593 - 74474 (-)
Gene ID: k141_166173_68
Type: TC
Location: 74658 - 75893 (-)
Gene ID: k141_166173_69
Type: CAZyme
Location: 76165 - 77118 (-)
Gene ID: k141_166173_70
Type: pfam
Location: 77123 - 77770 (-)
Gene ID: k141_166173_71
Type:
Location: 77773 - 77931 (-)
Gene ID: k141_166173_72
Type: TC
Location: 78002 - 80005 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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