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Cluster: KY043_24_sub_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_248534 k141_248534_3 2089 2820 + 3.A.1.26.9
pfam k141_248534 k141_248534_4 2845 3765 + SUFBD_core
CAZyme k141_248534 k141_248534_5 3777 5441 + CBM35 | GH26
TC k141_248534 k141_248534_6 6190 6816 - 9.B.28.1.2
TC k141_248534 k141_248534_7 6890 7852 - 3.A.1.1.29
TC k141_248534 k141_248534_8 7867 9357 - 3.A.1.1.29
TF k141_248534 k141_248534_9 9593 10465 + HTH_AraC | HTH_AraC
STP k141_248534 k141_248534_10 10462 11112 + HhH-GPD
TC k141_248534 k141_248534_11 11113 13113 + 2.A.16.2.2
Gene ID: k141_248534_3
Type: TC
Location: 2089 - 2820 (+)
Gene ID: k141_248534_4
Type: pfam
Location: 2845 - 3765 (+)
Gene ID: k141_248534_5
Type: CAZyme
Location: 3777 - 5441 (+)
Gene ID: k141_248534_6
Type: TC
Location: 6190 - 6816 (-)
Gene ID: k141_248534_7
Type: TC
Location: 6890 - 7852 (-)
Gene ID: k141_248534_8
Type: TC
Location: 7867 - 9357 (-)
Gene ID: k141_248534_9
Type: TF
Location: 9593 - 10465 (+)
Gene ID: k141_248534_10
Type: STP
Location: 10462 - 11112 (+)
Gene ID: k141_248534_11
Type: TC
Location: 11113 - 13113 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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