dbCAN Logo

Cluster: KY043_24_sub_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_158930 k141_158930_1 541 1524 + 3.A.1.24.2
TC k141_158930 k141_158930_2 1534 2220 + 3.A.1.24.5
TC k141_158930 k141_158930_3 2490 3446 + 3.A.1.24.5
TC k141_158930 k141_158930_4 3616 4269 + 3.A.1.3.18
TC k141_158930 k141_158930_5 4256 4936 + 3.A.1.3.8
TC k141_158930 k141_158930_6 4949 5692 + 3.A.1.3.14
TC k141_158930 k141_158930_7 5722 6609 + 3.A.1.3.10
pfam k141_158930 k141_158930_8 7513 7821 + Trns_repr_metal
TC k141_158930 k141_158930_9 7838 10330 + 3.A.3.5.18
CAZyme k141_158930 k141_158930_10 11016 12275 - GH3
CAZyme k141_158930 k141_158930_11 12294 13562 - CE17
Gene ID: k141_158930_1
Type: TC
Location: 541 - 1524 (+)
Gene ID: k141_158930_2
Type: TC
Location: 1534 - 2220 (+)
Gene ID: k141_158930_3
Type: TC
Location: 2490 - 3446 (+)
Gene ID: k141_158930_4
Type: TC
Location: 3616 - 4269 (+)
Gene ID: k141_158930_5
Type: TC
Location: 4256 - 4936 (+)
Gene ID: k141_158930_6
Type: TC
Location: 4949 - 5692 (+)
Gene ID: k141_158930_7
Type: TC
Location: 5722 - 6609 (+)
Gene ID: k141_158930_8
Type: pfam
Location: 7513 - 7821 (+)
Gene ID: k141_158930_9
Type: TC
Location: 7838 - 10330 (+)
Gene ID: k141_158930_10
Type: CAZyme
Location: 11016 - 12275 (-)
Gene ID: k141_158930_11
Type: CAZyme
Location: 12294 - 13562 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List