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Cluster: KY042_bin.68_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_225371 k141_225371_1 1 1269 - 3.A.1.135.6
TC k141_225371 k141_225371_2 1287 3044 - 3.A.1.135.6
TF k141_225371 k141_225371_3 3037 3516 - MarR
CAZyme k141_225371 k141_225371_4 3953 7789 - GH77 | GT35
pfam k141_225371 k141_225371_5 8105 8926 + Hydrolase | S6PP | S6PP | Hydrolase_3
pfam k141_225371 k141_225371_6 9049 9204 + DUF2292
TC k141_225371 k141_225371_7 9359 10384 + 3.A.1.14.16
TC k141_225371 k141_225371_8 10398 11174 + 3.A.1.14.2
STP k141_225371 k141_225371_9 11199 12143 + Peripla_BP_2
CAZyme k141_225371 k141_225371_10 12197 13342 - GT28
Gene ID: k141_225371_1
Type: TC
Location: 1 - 1269 (-)
Gene ID: k141_225371_2
Type: TC
Location: 1287 - 3044 (-)
Gene ID: k141_225371_3
Type: TF
Location: 3037 - 3516 (-)
Gene ID: k141_225371_4
Type: CAZyme
Location: 3953 - 7789 (-)
Gene ID: k141_225371_5
Type: pfam
Location: 8105 - 8926 (+)
Gene ID: k141_225371_6
Type: pfam
Location: 9049 - 9204 (+)
Gene ID: k141_225371_7
Type: TC
Location: 9359 - 10384 (+)
Gene ID: k141_225371_8
Type: TC
Location: 10398 - 11174 (+)
Gene ID: k141_225371_9
Type: STP
Location: 11199 - 12143 (+)
Gene ID: k141_225371_10
Type: CAZyme
Location: 12197 - 13342 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_225371_2 vegetarian > vegan 1.13515 0.00290

🧭 Explore Read Mapping of CGC

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