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Cluster: KY042_78_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_87562 k141_87562_1 1 231 + 3.A.1.11.2
TC k141_87562 k141_87562_2 262 1296 + 3.A.1.11.1
CAZyme k141_87562 k141_87562_3 1323 2438 + CE9
pfam k141_87562 k141_87562_4 3016 3636 - PRK
TC k141_87562 k141_87562_5 3867 4583 + 3.A.1.147.6
TC k141_87562 k141_87562_6 4580 6175 + 3.A.1.147.6
pfam k141_87562 k141_87562_7 6647 7672 - 2-Hacid_dh | 2-Hacid_dh_C
pfam k141_87562 k141_87562_8 7703 8035 - AraC_binding | Cupin_2
TC k141_87562 k141_87562_9 8773 9498 - 3.A.1.4.10
TC k141_87562 k141_87562_10 9495 10334 - 3.A.1.4.10
TC k141_87562 k141_87562_11 10331 11470 - 3.A.1.4.8
TC k141_87562 k141_87562_12 11481 12404 - 3.A.1.4.10
pfam k141_87562 k141_87562_13 12527 13678 - ANF_receptor | Peripla_BP_6
TF k141_87562 k141_87562_14 14312 14812 + MarR
TC k141_87562 k141_87562_15 14806 16563 + 3.A.1.135.6
TC k141_87562 k141_87562_16 16577 18361 + 3.A.1.135.6
Gene ID: k141_87562_1
Type: TC
Location: 1 - 231 (+)
Gene ID: k141_87562_2
Type: TC
Location: 262 - 1296 (+)
Gene ID: k141_87562_3
Type: CAZyme
Location: 1323 - 2438 (+)
Gene ID: k141_87562_4
Type: pfam
Location: 3016 - 3636 (-)
Gene ID: k141_87562_5
Type: TC
Location: 3867 - 4583 (+)
Gene ID: k141_87562_6
Type: TC
Location: 4580 - 6175 (+)
Gene ID: k141_87562_7
Type: pfam
Location: 6647 - 7672 (-)
Gene ID: k141_87562_8
Type: pfam
Location: 7703 - 8035 (-)
Gene ID: k141_87562_9
Type: TC
Location: 8773 - 9498 (-)
Gene ID: k141_87562_10
Type: TC
Location: 9495 - 10334 (-)
Gene ID: k141_87562_11
Type: TC
Location: 10331 - 11470 (-)
Gene ID: k141_87562_12
Type: TC
Location: 11481 - 12404 (-)
Gene ID: k141_87562_13
Type: pfam
Location: 12527 - 13678 (-)
Gene ID: k141_87562_14
Type: TF
Location: 14312 - 14812 (+)
Gene ID: k141_87562_15
Type: TC
Location: 14806 - 16563 (+)
Gene ID: k141_87562_16
Type: TC
Location: 16577 - 18361 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_87562_5 vegetarian > vegan 1.42134 0.00455

🧭 Explore Read Mapping of CGC

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