Cluster: KY042_78_CGC11
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: KY042_78
- CGC Family ID: CGCFAM_00006
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_201922 | k141_201922_23 | 23895 | 25364 | + | 9.B.18.1.2 |
| CAZyme | k141_201922 | k141_201922_24 | 25618 | 26886 | + | GT4 |
| pfam | k141_201922 | k141_201922_25 | 26902 | 27474 | + | Hexapep | Hexapep_2 |
| pfam | k141_201922 | k141_201922_26 | 27486 | 28481 | + | Acyl_transf_3 |
| CAZyme | k141_201922 | k141_201922_27 | 28478 | 29383 | + | GT2 |
| pfam | k141_201922 | k141_201922_28 | 29395 | 30039 | + | Hexapep | Hexapep_2 |
| CAZyme | k141_201922 | k141_201922_29 | 30036 | 31193 | + | GT4 |
| CAZyme | k141_201922 | k141_201922_30 | 31399 | 32424 | + | GT10 |
| NULL(UNKNOWN) | k141_201922 | k141_201922_31 | 32600 | 33457 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_201922 | k141_201922_32 | 33462 | 34391 | + | GT2 |
| CAZyme | k141_201922 | k141_201922_33 | 34440 | 35708 | + | GT4 |
| TC | k141_201922 | k141_201922_34 | 35705 | 37237 | + | 2.A.66.1.40 |
Gene ID: k141_201922_23
Type: TC
Location: 23895 - 25364 (+)
Type: TC
Location: 23895 - 25364 (+)
Gene ID: k141_201922_24
Type: CAZyme
Location: 25618 - 26886 (+)
Type: CAZyme
Location: 25618 - 26886 (+)
Gene ID: k141_201922_25
Type: pfam
Location: 26902 - 27474 (+)
Type: pfam
Location: 26902 - 27474 (+)
Gene ID: k141_201922_26
Type: pfam
Location: 27486 - 28481 (+)
Type: pfam
Location: 27486 - 28481 (+)
Gene ID: k141_201922_27
Type: CAZyme
Location: 28478 - 29383 (+)
Type: CAZyme
Location: 28478 - 29383 (+)
Gene ID: k141_201922_28
Type: pfam
Location: 29395 - 30039 (+)
Type: pfam
Location: 29395 - 30039 (+)
Gene ID: k141_201922_29
Type: CAZyme
Location: 30036 - 31193 (+)
Type: CAZyme
Location: 30036 - 31193 (+)
Gene ID: k141_201922_30
Type: CAZyme
Location: 31399 - 32424 (+)
Type: CAZyme
Location: 31399 - 32424 (+)
Gene ID: k141_201922_31
Type:
Location: 32600 - 33457 (+)
Type:
Location: 32600 - 33457 (+)
Gene ID: k141_201922_32
Type: CAZyme
Location: 33462 - 34391 (+)
Type: CAZyme
Location: 33462 - 34391 (+)
Gene ID: k141_201922_33
Type: CAZyme
Location: 34440 - 35708 (+)
Type: CAZyme
Location: 34440 - 35708 (+)
Gene ID: k141_201922_34
Type: TC
Location: 35705 - 37237 (+)
Type: TC
Location: 35705 - 37237 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp934621485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_201922_24 | vegan > omnivore | 1.87044 | 0.01067 |
| k141_201922_25 | vegan > omnivore | 1.07856 | 0.01067 |
| k141_201922_25 | vegetarian > omnivore | 1.37083 | 0.03201 |