Cluster: KY042_43_CGC4
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: KY042_43
- CGC Family ID: CGCFAM_10322
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_172912 | k141_172912_85 | 87764 | 89671 | + | CBM48 | GH13_9 |
| pfam | k141_172912 | k141_172912_86 | 89700 | 90911 | + | NTP_transferase | Hexapep_GlmU |
| pfam | k141_172912 | k141_172912_87 | 90901 | 92010 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | k141_172912 | k141_172912_88 | 92026 | 93453 | + | GT5 |
| pfam | k141_172912 | k141_172912_89 | 93502 | 93933 | - | RuvX |
| STP | k141_172912 | k141_172912_90 | 94145 | 96469 | + | SpoIIE |
| CAZyme | k141_172912 | k141_172912_91 | 96517 | 97656 | - | GT28 |
| pfam | k141_172912 | k141_172912_92 | 98166 | 99836 | + | VanW | PG_binding_4 |
| CAZyme | k141_172912 | k141_172912_93 | 100051 | 104097 | - | GH13_19 |
| TC | k141_172912 | k141_172912_94 | 104337 | 105047 | - | 3.A.1.4.10 |
| TC | k141_172912 | k141_172912_95 | 105040 | 105885 | - | 3.A.1.4.10 |
| TC | k141_172912 | k141_172912_96 | 105857 | 106960 | - | 3.A.1.4.8 |
| TC | k141_172912 | k141_172912_97 | 106968 | 107852 | - | 3.A.1.4.10 |
Gene ID: k141_172912_85
Type: CAZyme
Location: 87764 - 89671 (+)
Type: CAZyme
Location: 87764 - 89671 (+)
Gene ID: k141_172912_86
Type: pfam
Location: 89700 - 90911 (+)
Type: pfam
Location: 89700 - 90911 (+)
Gene ID: k141_172912_87
Type: pfam
Location: 90901 - 92010 (+)
Type: pfam
Location: 90901 - 92010 (+)
Gene ID: k141_172912_88
Type: CAZyme
Location: 92026 - 93453 (+)
Type: CAZyme
Location: 92026 - 93453 (+)
Gene ID: k141_172912_89
Type: pfam
Location: 93502 - 93933 (-)
Type: pfam
Location: 93502 - 93933 (-)
Gene ID: k141_172912_90
Type: STP
Location: 94145 - 96469 (+)
Type: STP
Location: 94145 - 96469 (+)
Gene ID: k141_172912_91
Type: CAZyme
Location: 96517 - 97656 (-)
Type: CAZyme
Location: 96517 - 97656 (-)
Gene ID: k141_172912_92
Type: pfam
Location: 98166 - 99836 (+)
Type: pfam
Location: 98166 - 99836 (+)
Gene ID: k141_172912_93
Type: CAZyme
Location: 100051 - 104097 (-)
Type: CAZyme
Location: 100051 - 104097 (-)
Gene ID: k141_172912_94
Type: TC
Location: 104337 - 105047 (-)
Type: TC
Location: 104337 - 105047 (-)
Gene ID: k141_172912_95
Type: TC
Location: 105040 - 105885 (-)
Type: TC
Location: 105040 - 105885 (-)
Gene ID: k141_172912_96
Type: TC
Location: 105857 - 106960 (-)
Type: TC
Location: 105857 - 106960 (-)
Gene ID: k141_172912_97
Type: TC
Location: 106968 - 107852 (-)
Type: TC
Location: 106968 - 107852 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp900543095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.