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Cluster: KY042_43_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_81878 k141_81878_1 149 1006 + 3.A.1.103.4
TC k141_81878 k141_81878_2 1019 2302 + 3.A.1.103.5
pfam k141_81878 k141_81878_3 2502 3437 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd
CAZyme k141_81878 k141_81878_4 3434 4489 + GT8
CAZyme k141_81878 k141_81878_5 4598 5572 + GT2
CAZyme k141_81878 k141_81878_6 5569 6564 + GT2
CAZyme k141_81878 k141_81878_7 6568 7545 + GT2
CAZyme k141_81878 k141_81878_8 7549 8304 + GT32
CAZyme k141_81878 k141_81878_9 8295 9260 + GT2
Gene ID: k141_81878_1
Type: TC
Location: 149 - 1006 (+)
Gene ID: k141_81878_2
Type: TC
Location: 1019 - 2302 (+)
Gene ID: k141_81878_3
Type: pfam
Location: 2502 - 3437 (+)
Gene ID: k141_81878_4
Type: CAZyme
Location: 3434 - 4489 (+)
Gene ID: k141_81878_5
Type: CAZyme
Location: 4598 - 5572 (+)
Gene ID: k141_81878_6
Type: CAZyme
Location: 5569 - 6564 (+)
Gene ID: k141_81878_7
Type: CAZyme
Location: 6568 - 7545 (+)
Gene ID: k141_81878_8
Type: CAZyme
Location: 7549 - 8304 (+)
Gene ID: k141_81878_9
Type: CAZyme
Location: 8295 - 9260 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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