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Cluster: KY042_131_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_172443 k141_172443_6 4073 5188 - 3.B.1.1.5
pfam k141_172443 k141_172443_7 5756 7168 + PK | PK_C
CAZyme k141_172443 k141_172443_8 7252 9537 - GH95
pfam k141_172443 k141_172443_9 10589 11806 - zf-HC2 | DUF4349
STP k141_172443 k141_172443_10 11831 12415 - Sigma70_r2 | Sigma70_r4_2
TC k141_172443 k141_172443_11 12631 13062 - 1.A.22.1.3
TC k141_172443 k141_172443_12 13271 14380 + 3.A.1.2.12
TC k141_172443 k141_172443_13 14808 16355 + 3.A.1.2.12
TC k141_172443 k141_172443_14 16358 17611 + 3.A.1.2.17
TC k141_172443 k141_172443_15 17608 18627 + 3.A.1.2.17
Gene ID: k141_172443_6
Type: TC
Location: 4073 - 5188 (-)
Gene ID: k141_172443_7
Type: pfam
Location: 5756 - 7168 (+)
Gene ID: k141_172443_8
Type: CAZyme
Location: 7252 - 9537 (-)
Gene ID: k141_172443_9
Type: pfam
Location: 10589 - 11806 (-)
Gene ID: k141_172443_10
Type: STP
Location: 11831 - 12415 (-)
Gene ID: k141_172443_11
Type: TC
Location: 12631 - 13062 (-)
Gene ID: k141_172443_12
Type: TC
Location: 13271 - 14380 (+)
Gene ID: k141_172443_13
Type: TC
Location: 14808 - 16355 (+)
Gene ID: k141_172443_14
Type: TC
Location: 16358 - 17611 (+)
Gene ID: k141_172443_15
Type: TC
Location: 17608 - 18627 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_172443_12 vegetarian > vegan 1.16708 0.00290
k141_172443_15 vegetarian > vegan 1.00497 0.00290

🧭 Explore Read Mapping of CGC

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