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Cluster: KY042_131_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_9642 k141_9642_11 13862 15217 + 2.A.26.1.3
pfam k141_9642 k141_9642_12 15593 19912 + RNase_T | PHP | DNA_pol3_alpha | DNA_pol3_alpha | DNA_pol3_a_NII | HHH_6 | DNA_pol3_finger
TF k141_9642 k141_9642_13 20983 21756 - HTH_AraC
CAZyme k141_9642 k141_9642_14 21875 23386 + GH51_1
TF k141_9642 k141_9642_15 23510 24181 + Trans_reg_C
STP k141_9642 k141_9642_16 24188 25177 + HATPase_c
TC k141_9642 k141_9642_17 25317 26081 + 3.A.1.134.4
TC k141_9642 k141_9642_18 26078 28132 + 3.A.1.134.9
Gene ID: k141_9642_11
Type: TC
Location: 13862 - 15217 (+)
Gene ID: k141_9642_12
Type: pfam
Location: 15593 - 19912 (+)
Gene ID: k141_9642_13
Type: TF
Location: 20983 - 21756 (-)
Gene ID: k141_9642_14
Type: CAZyme
Location: 21875 - 23386 (+)
Gene ID: k141_9642_15
Type: TF
Location: 23510 - 24181 (+)
Gene ID: k141_9642_16
Type: STP
Location: 24188 - 25177 (+)
Gene ID: k141_9642_17
Type: TC
Location: 25317 - 26081 (+)
Gene ID: k141_9642_18
Type: TC
Location: 26078 - 28132 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_9642_17 vegetarian > vegan 1.12426 0.00290

🧭 Explore Read Mapping of CGC

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