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Cluster: KY040_54_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_364857 k141_364857_3 2457 3974 + 3.A.1.120.2
pfam k141_364857 k141_364857_4 4143 4700 + Acetyltransf_1 | Acetyltransf_4 | Acetyltransf_7 | Acetyltransf_10
TC k141_364857 k141_364857_5 5041 5940 + 3.A.1.147.8
pfam k141_364857 k141_364857_6 5944 7185 + ABC2_membrane_3
STP k141_364857 k141_364857_7 7524 8093 + TetR_N
CAZyme k141_364857 k141_364857_8 8083 10434 + GH2
TC k141_364857 k141_364857_9 10425 11810 + 2.A.2.1.1
CAZyme k141_364857 k141_364857_10 11803 13380 + GH36
Gene ID: k141_364857_3
Type: TC
Location: 2457 - 3974 (+)
Gene ID: k141_364857_4
Type: pfam
Location: 4143 - 4700 (+)
Gene ID: k141_364857_5
Type: TC
Location: 5041 - 5940 (+)
Gene ID: k141_364857_6
Type: pfam
Location: 5944 - 7185 (+)
Gene ID: k141_364857_7
Type: STP
Location: 7524 - 8093 (+)
Gene ID: k141_364857_8
Type: CAZyme
Location: 8083 - 10434 (+)
Gene ID: k141_364857_9
Type: TC
Location: 10425 - 11810 (+)
Gene ID: k141_364857_10
Type: CAZyme
Location: 11803 - 13380 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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