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Cluster: KY023_bin.65_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_189561 k141_189561_6 2659 3960 - 3.D.10.1.6
pfam k141_189561 k141_189561_7 3995 4903 - NadA
TF k141_189561 k141_189561_8 5048 7135 - Mga
TC k141_189561 k141_189561_9 7162 8256 - 4.A.7.1.2
pfam k141_189561 k141_189561_10 8295 8576 - PTS_IIB
TC k141_189561 k141_189561_11 8593 9033 - 4.A.7.1.1
pfam k141_189561 k141_189561_12 9250 9840 - Metallophos | Metallophos_2
pfam k141_189561 k141_189561_13 9848 11560 - Bmp
TC k141_189561 k141_189561_14 11679 12785 - 3.A.1.1.26
CAZyme k141_189561 k141_189561_15 12798 14861 - GH3
CAZyme k141_189561 k141_189561_16 14878 17208 - GH31_3
Gene ID: k141_189561_6
Type: TC
Location: 2659 - 3960 (-)
Gene ID: k141_189561_7
Type: pfam
Location: 3995 - 4903 (-)
Gene ID: k141_189561_8
Type: TF
Location: 5048 - 7135 (-)
Gene ID: k141_189561_9
Type: TC
Location: 7162 - 8256 (-)
Gene ID: k141_189561_10
Type: pfam
Location: 8295 - 8576 (-)
Gene ID: k141_189561_11
Type: TC
Location: 8593 - 9033 (-)
Gene ID: k141_189561_12
Type: pfam
Location: 9250 - 9840 (-)
Gene ID: k141_189561_13
Type: pfam
Location: 9848 - 11560 (-)
Gene ID: k141_189561_14
Type: TC
Location: 11679 - 12785 (-)
Gene ID: k141_189561_15
Type: CAZyme
Location: 12798 - 14861 (-)
Gene ID: k141_189561_16
Type: CAZyme
Location: 14878 - 17208 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_189561_7 vegan > omnivore 2.54182 0.00430

🧭 Explore Read Mapping of CGC

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