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Cluster: KY023_bin.65_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_206984 k141_206984_9 6393 7820 - AA4
TC k141_206984 k141_206984_10 7881 9434 - 2.A.14.1.2
TC k141_206984 k141_206984_11 9756 11105 - 2.A.66.1.26
TF k141_206984 k141_206984_12 11379 11819 - MarR
peptidase k141_206984 k141_206984_13 12318 13541 + M20.UPB
TC k141_206984 k141_206984_14 13750 15414 - 3.A.1.106.11
TC k141_206984 k141_206984_15 15416 17179 - 3.A.1.106.12
pfam k141_206984 k141_206984_16 17172 17579 - DUF454
TC k141_206984 k141_206984_17 17605 18414 - 3.A.1.14.10
TC k141_206984 k141_206984_18 18404 19465 - 3.A.1.14.10
TC k141_206984 k141_206984_19 19466 20488 - 3.A.1.14.10
TC k141_206984 k141_206984_20 20460 21365 - 3.A.1.14.10
TC k141_206984 k141_206984_21 21368 22894 - 8.A.43.1.1
TC k141_206984 k141_206984_22 22953 25169 - 8.A.43.1.1
Gene ID: k141_206984_9
Type: CAZyme
Location: 6393 - 7820 (-)
Gene ID: k141_206984_10
Type: TC
Location: 7881 - 9434 (-)
Gene ID: k141_206984_11
Type: TC
Location: 9756 - 11105 (-)
Gene ID: k141_206984_12
Type: TF
Location: 11379 - 11819 (-)
Gene ID: k141_206984_13
Type: peptidase
Location: 12318 - 13541 (+)
Gene ID: k141_206984_14
Type: TC
Location: 13750 - 15414 (-)
Gene ID: k141_206984_15
Type: TC
Location: 15416 - 17179 (-)
Gene ID: k141_206984_16
Type: pfam
Location: 17172 - 17579 (-)
Gene ID: k141_206984_17
Type: TC
Location: 17605 - 18414 (-)
Gene ID: k141_206984_18
Type: TC
Location: 18404 - 19465 (-)
Gene ID: k141_206984_19
Type: TC
Location: 19466 - 20488 (-)
Gene ID: k141_206984_20
Type: TC
Location: 20460 - 21365 (-)
Gene ID: k141_206984_21
Type: TC
Location: 21368 - 22894 (-)
Gene ID: k141_206984_22
Type: TC
Location: 22953 - 25169 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_206984_9 vegan > omnivore 1.01905 0.00430
k141_206984_13 vegan > omnivore 1.36675 0.00430
k141_206984_14 vegan > omnivore 1.26270 0.00430
k141_206984_16 vegan > omnivore 3.17324 0.00430
k141_206984_17 vegan > omnivore 1.20822 0.00430
k141_206984_18 vegan > omnivore 2.13917 0.00430
k141_206984_19 vegan > omnivore 2.82322 0.00430

🧭 Explore Read Mapping of CGC

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