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Cluster: KY023_bin.60_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_108818 k141_108818_1 23 1369 + 3.A.1.1.44
TC k141_108818 k141_108818_2 1459 2352 + 3.A.1.1.23
TC k141_108818 k141_108818_3 2364 3215 + 3.A.1.1.25
pfam k141_108818 k141_108818_4 3637 3924 - HTH_28 | HTH_29
TF k141_108818 k141_108818_5 4379 5920 - HTH_AraC | HTH_AraC
TC k141_108818 k141_108818_6 5898 7715 - 8.A.59.2.1
TC k141_108818 k141_108818_7 7881 9311 + 3.A.1.1.18
TC k141_108818 k141_108818_8 9393 10307 + 3.A.1.1.18
TC k141_108818 k141_108818_9 10304 11158 + 3.A.1.1.18
CAZyme k141_108818 k141_108818_10 11177 13678 + GH95
CAZyme k141_108818 k141_108818_11 13685 15835 + GH95
CAZyme k141_108818 k141_108818_12 15802 17985 + GH112
Gene ID: k141_108818_1
Type: TC
Location: 23 - 1369 (+)
Gene ID: k141_108818_2
Type: TC
Location: 1459 - 2352 (+)
Gene ID: k141_108818_3
Type: TC
Location: 2364 - 3215 (+)
Gene ID: k141_108818_4
Type: pfam
Location: 3637 - 3924 (-)
Gene ID: k141_108818_5
Type: TF
Location: 4379 - 5920 (-)
Gene ID: k141_108818_6
Type: TC
Location: 5898 - 7715 (-)
Gene ID: k141_108818_7
Type: TC
Location: 7881 - 9311 (+)
Gene ID: k141_108818_8
Type: TC
Location: 9393 - 10307 (+)
Gene ID: k141_108818_9
Type: TC
Location: 10304 - 11158 (+)
Gene ID: k141_108818_10
Type: CAZyme
Location: 11177 - 13678 (+)
Gene ID: k141_108818_11
Type: CAZyme
Location: 13685 - 15835 (+)
Gene ID: k141_108818_12
Type: CAZyme
Location: 15802 - 17985 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_108818_4 vegetarian > omnivore 1.38317 0.00398
k141_108818_12 vegan > omnivore 1.35787 0.03783

🧭 Explore Read Mapping of CGC

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