Cluster: KY013_bin.70_CGC18
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 8
- Substrate:
- Genome ID: KY013_bin.70
- CGC Family ID: CGCFAM_00060
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_118817 | k141_118817_69 | 83164 | 83808 | - | GT2 |
| NULL(UNKNOWN) | k141_118817 | k141_118817_70 | 84099 | 84290 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_118817 | k141_118817_71 | 84645 | 86093 | - | 2.A.66.2.23 |
| CAZyme | k141_118817 | k141_118817_72 | 86110 | 87081 | - | GT92 |
| NULL(UNKNOWN) | k141_118817 | k141_118817_73 | 87100 | 87996 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_118817 | k141_118817_74 | 87989 | 88933 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NmrA | NAD_binding_10 | GDP_Man_Dehyd |
| CAZyme | k141_118817 | k141_118817_75 | 89053 | 89958 | - | GT2 |
| CAZyme | k141_118817 | k141_118817_76 | 90147 | 91079 | + | GT2 |
| CAZyme | k141_118817 | k141_118817_77 | 91150 | 93702 | - | GH73 |
| NULL(UNKNOWN) | k141_118817 | k141_118817_78 | 93840 | 94640 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_118817 | k141_118817_79 | 94788 | 95816 | - | GT2 |
| CAZyme | k141_118817 | k141_118817_80 | 95824 | 96927 | - | GT2 |
| pfam | k141_118817 | k141_118817_81 | 97039 | 98184 | + | Acyl_transf_3 |
| NULL(UNKNOWN) | k141_118817 | k141_118817_82 | 98181 | 99521 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_118817 | k141_118817_83 | 99759 | 100778 | + | GT2 |
Gene ID: k141_118817_69
Type: CAZyme
Location: 83164 - 83808 (-)
Type: CAZyme
Location: 83164 - 83808 (-)
Gene ID: k141_118817_70
Type:
Location: 84099 - 84290 (+)
Type:
Location: 84099 - 84290 (+)
Gene ID: k141_118817_71
Type: TC
Location: 84645 - 86093 (-)
Type: TC
Location: 84645 - 86093 (-)
Gene ID: k141_118817_72
Type: CAZyme
Location: 86110 - 87081 (-)
Type: CAZyme
Location: 86110 - 87081 (-)
Gene ID: k141_118817_73
Type:
Location: 87100 - 87996 (-)
Type:
Location: 87100 - 87996 (-)
Gene ID: k141_118817_74
Type: pfam
Location: 87989 - 88933 (-)
Type: pfam
Location: 87989 - 88933 (-)
Gene ID: k141_118817_75
Type: CAZyme
Location: 89053 - 89958 (-)
Type: CAZyme
Location: 89053 - 89958 (-)
Gene ID: k141_118817_76
Type: CAZyme
Location: 90147 - 91079 (+)
Type: CAZyme
Location: 90147 - 91079 (+)
Gene ID: k141_118817_77
Type: CAZyme
Location: 91150 - 93702 (-)
Type: CAZyme
Location: 91150 - 93702 (-)
Gene ID: k141_118817_78
Type:
Location: 93840 - 94640 (-)
Type:
Location: 93840 - 94640 (-)
Gene ID: k141_118817_79
Type: CAZyme
Location: 94788 - 95816 (-)
Type: CAZyme
Location: 94788 - 95816 (-)
Gene ID: k141_118817_80
Type: CAZyme
Location: 95824 - 96927 (-)
Type: CAZyme
Location: 95824 - 96927 (-)
Gene ID: k141_118817_81
Type: pfam
Location: 97039 - 98184 (+)
Type: pfam
Location: 97039 - 98184 (+)
Gene ID: k141_118817_82
Type:
Location: 98181 - 99521 (-)
Type:
Location: 98181 - 99521 (-)
Gene ID: k141_118817_83
Type: CAZyme
Location: 99759 - 100778 (+)
Type: CAZyme
Location: 99759 - 100778 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.