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Cluster: KY007_bin.89_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_455977 k141_455977_6 3788 5158 + 3.D.6.1.2
TC k141_455977 k141_455977_7 5158 6222 + 3.D.6.1.2
pfam k141_455977 k141_455977_8 6222 6827 + FMN_bind
TC k141_455977 k141_455977_9 6820 7467 + 3.D.6.1.2
TC k141_455977 k141_455977_10 7470 8048 + 3.D.6.1.4
TC k141_455977 k141_455977_11 8078 8902 + 3.D.6.1.2
pfam k141_455977 k141_455977_12 9002 10387 - Lyase_1 | FumaraseC_C
pfam k141_455977 k141_455977_13 10504 11445 - Ldh_1_N | Ldh_1_C
CAZyme k141_455977 k141_455977_14 11584 12660 - GT4
CAZyme k141_455977 k141_455977_15 12674 13792 - GT4
CAZyme k141_455977 k141_455977_16 13789 14838 - GT4
Gene ID: k141_455977_6
Type: TC
Location: 3788 - 5158 (+)
Gene ID: k141_455977_7
Type: TC
Location: 5158 - 6222 (+)
Gene ID: k141_455977_8
Type: pfam
Location: 6222 - 6827 (+)
Gene ID: k141_455977_9
Type: TC
Location: 6820 - 7467 (+)
Gene ID: k141_455977_10
Type: TC
Location: 7470 - 8048 (+)
Gene ID: k141_455977_11
Type: TC
Location: 8078 - 8902 (+)
Gene ID: k141_455977_12
Type: pfam
Location: 9002 - 10387 (-)
Gene ID: k141_455977_13
Type: pfam
Location: 10504 - 11445 (-)
Gene ID: k141_455977_14
Type: CAZyme
Location: 11584 - 12660 (-)
Gene ID: k141_455977_15
Type: CAZyme
Location: 12674 - 13792 (-)
Gene ID: k141_455977_16
Type: CAZyme
Location: 13789 - 14838 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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